RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MALT1Q9UDY8 824 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 GSC2O15499 205 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 SUV39H1O43463 412 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 MATN1P21941 496 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 PBX3P40426 434 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 ETV5P41161 510 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 GALNT7Q86SF2 657 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 PHOX2BQ99453 314 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
RAPGEF1-202ENST00000372190 RAB19A4D1S5 217 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 BBIP1A8MTZ0 92 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 CILPO75339 1184 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RASGRP1O95267 797 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 CCNYL3P0C7X3 344 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 DNASE1L1P49184 302 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RGS8P57771 180 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 LILRA4P59901 499 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ACSM2AQ08AH3 577 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TIGD5Q53EQ6 642 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ACSM2BQ68CK6 577 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 SDR16C5Q8N3Y7 309 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ESX1Q8N693 406 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 UFD1Q92890 307 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TMEM203Q969S6 136 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MYO19Q96H55 970 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RAD9AQ99638 391 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 CIB1Q99828 191 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 CCDC106Q9BWC9 280 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 FAM126AQ9BYI3 521 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MTRRQ9UBK8 725 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 A0A0A0MRY4 1105 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TXNL1O43396 289 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RPS9P46781 194 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 DGKGP49619 791 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 HSPA14Q0VDF9 509 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ARSKQ6UWY0 536 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TNFRSF25Q93038 417 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MARK4Q96L34 752 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 EIF5A2Q9GZV4 153 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 NECTIN3Q9NQS3 549 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 COPZ2Q9P299 210 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MFHAS1Q9Y4C4 1052 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 FBP2O00757 339 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PRNPP04156 253 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TACR2P21452 398 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MTHFRP42898 656 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ALDH3B1P43353 468 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 CDH13P55290 713 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PAPD4Q6PIY7 484 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PCED1BQ96HM7 432 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 FAM84AQ96KN4 292 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ANKDD1BA6NHY2 528 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 FADS2P1A8MWK0 482 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 IFNA1P01562 189 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 SLC35G4P0C7Q5 338 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MAXP61244 160 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 NOMO3P69849 1222 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PON3Q15166 354 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR10G6Q8NH81 332 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 SHC3Q92529 594 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 FUZQ9BT04 418 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RSPH9Q9H1X1 276 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ACOX3O15254 700 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 BUD23O43709 281 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ACSL4O60488 711 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR3A3P47888 321 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR3A2P47893 321 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ALG10Q5BKT4 473 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 PDZD9Q8IXQ8 264 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 JPH3Q8WXH2 748 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 TRIB2Q92519 343 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 RERGQ96A58 199 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 MALSU1Q96EH3 234 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF670Q9BS34 389 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ABCG8Q9H221 673 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ERVW-1Q9UQF0 538 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
RAPGEF1-202ENST00000372190 BORCS7-ASMTA0A0B4J1R7 106 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 HSPA12AO43301 675 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 SLC25A14O95258 325 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 H6PDO95479 791 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 CHMP24386 653 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 RPL3P39023 403 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms