RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PWWP2AQ96N64 755 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 TNFRSF10DQ9UBN6 386 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 SSR2P43308 183 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 APOLD1Q96LR9 279 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ASCC3Q8N3C0 2202 aaKnown RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 ARL6IP5O75915 188 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 DNAJB5O75953 348 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 SLC34A2O95436 690 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 HLA-DPB1P04440 258 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 UGT2B10P36537 528 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PRPF38BQ5VTL8 546 aaKnown RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF676Q8N7Q3 588 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF565Q8N9K5 539 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 CHST13Q8NET6 341 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PPP1R16AQ96I34 528 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 MAGED1Q9Y5V3 778 aaPredicted RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
COL5A1-201ENST00000371817 MARVELD2Q8N4S9 558 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 PCDHB18PQ96TA0 734 aa15□□□□□ -0.01
COL5A1-201ENST00000371817 OR6C74A6NCV1 312 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 RCCD1A6NED2 376 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 IDH3GP51553 393 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SMSP52788 366 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 GBE1Q04446 702 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF550Q7Z398 422 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 CELF1Q92879 486 aaKnown RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ARL11Q969Q4 196 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZDHHC6Q9H6R6 413 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 NEUROD4Q9HD90 331 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF254O75437 659 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ALDH3B1P43353 468 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 OR12D2P58182 307 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 NOMO3P69849 1222 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 NOMO1Q15155 1222 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 DCDC5Q6ZRR9 648 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 BEX1Q9HBH7 125 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SOHLH2Q9NX45 425 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TET3O43151 1660 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 AP2A1O95782 977 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 NKX2-5P52952 324 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 CDH8P55286 799 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 PFKPQ01813 784 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 C2orf80Q0P641 193 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ARL14Q8N4G2 192 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM109Q9BVC6 243 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 NELFAQ9H3P2 528 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZFYVE16Q7Z3T8 1539 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 GKN3PP0CG01 181 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 GOT1P17174 413 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SLC26A2P50443 739 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 PUM1Q14671 1186 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 MSANTD2Q6P1R3 559 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 CCBE1Q6UXH8 406 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SULT4A1Q9BR01 284 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 C1orf21Q9H246 121 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 BPIFA1Q9NP55 256 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 MAP2K3P46734 347 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 MTPNP58546 118 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 MAPK14Q16539 360 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 C14orf28Q4W4Y0 310 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 EIPR1Q53HC9 387 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF574Q6ZN55 896 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF598Q86UK7 904 aaKnown RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 C4orf19Q8IY42 314 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 BEST3Q8N1M1 668 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 HEPHQ9BQS7 1158 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF282Q9UDV7 671 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 COL15A1P39059 1388 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SALL1Q9NSC2 1324 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TXNL1O43396 289 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TPSB2P20231 275 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 RXRBP28702 533 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TPSAB1Q15661 275 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 DCST2Q5T1A1 773 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ARL9Q6T311 187 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SLC7A5P1Q8MH63 180 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 PIGBQ92521 554 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 C5orf34Q96MH7 638 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 CALML5Q9NZT1 146 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 MRPS33Q9Y291 106 aaKnown RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TEX13DA0A0J9YY54 714 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SRPRAP08240 638 aaKnown RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 GRK6P43250 576 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 THOP1P52888 689 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 SCGB2A2Q13296 93 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 RAB39AQ14964 217 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF101Q8IZC7 436 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 RRNAD1Q96FB5 475 aaKnown RBP14.99□□□□□ -0.01
COL5A1-201ENST00000371817 KLHL15Q96M94 604 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 TBX5Q99593 518 aa14.99□□□□□ -0.01
COL5A1-201ENST00000371817 A0A1W2PPW3 197 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 SLC25A27O95847 323 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CKMT2P17540 419 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CD6P30203 668 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CXCR3P49682 368 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 ERVK-25P63136 954 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms