RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 C1QTNF1Q9BXJ1 281 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 DDX18Q9NVP1 670 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 IMPAD1Q9NX62 359 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 INTS6Q9UL03 887 aaKnown RBP6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 SH3GLB1Q9Y371 365 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 DGKBQ9Y6T7 804 aa6.96□□□□□ -1.29
TGFBR3-202ENST00000370399 FAM92AA1XBS5 289 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 LINC01553A4QN01 128 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 FPGTO14772 594 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 LATS1O95835 1130 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 GSTM1P09488 218 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CYP4B1P13584 511 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 UQCRBP14927 111 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 GSK3BP49841 420 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 RAD23AP54725 363 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 RFTN2Q52LD8 501 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 FGD3Q5JSP0 725 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CES4AQ5XG92 561 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 GALNT13Q8IUC8 556 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 HID1Q8IV36 788 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 OFCC1Q8IZS5 231 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 HMGB4Q8WW32 186 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 FOXJ1Q92949 421 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 SIPA1Q96FS4 1042 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ATOH8Q96SQ7 321 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CCM2Q9BSQ5 444 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 DCUN1D5Q9BTE7 237 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 KLHL25Q9H0H3 589 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 WDR26Q9H7D7 661 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 RAB23Q9ULC3 237 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 PCDHGA11Q9Y5H2 935 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 EDDM13A0A1B0GTR0 161 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 A0A1W2PP18 115 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ELOVL7A1L3X0 281 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CAPN14A8MX76 684 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 PEX11BO96011 259 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 IGLV3-27P01718 113 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 HNRNPA1P09651 372 aaKnown RBP eCLIP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 DNAJB1P25685 340 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 SOX9P48436 509 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CCNYL2Q5T2Q4 361 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 TMEM26Q6ZUK4 368 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 THOC6Q86W42 341 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 HEATR4Q86WZ0 1026 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ANKLE1Q8NAG6 615 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 NELL1Q92832 810 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 EXOSC8Q96B26 276 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 OTUB2Q96DC9 234 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ZNF570Q96NI8 536 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 ANKRD27Q96NW4 1050 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 CARS2Q9HA77 564 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 POPDC3Q9HBV1 291 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 INTS7Q9NVH2 962 aaKnown RBP6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 VPS29Q9UBQ0 182 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 PCTPQ9UKL6 214 aa6.96□□□□□ -1.3
TGFBR3-202ENST00000370399 PLXNB2O15031 1838 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 SEC16AO15027 2179 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 FAM234BA2RU67 622 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 IGLON5A6NGN9 336 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CYP7B1O75881 506 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 TNFAIP8O95379 198 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 PGRP06401 933 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 IDSP22304 550 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 IDH2P48735 452 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CHN2P52757 468 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 MANFP55145 182 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 MS4A2Q01362 244 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ELAVL3Q14576 367 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CTC1Q2NKJ3 1217 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CTSL3PQ5NE16 218 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 TMEM240Q5SV17 173 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 SLC30A9Q6PML9 568 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 OR2A12Q8NGT7 310 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 LKAAEAR1Q8TD35 194 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ROPN1LQ96C74 230 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 TUBGCP5Q96RT8 1024 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CHID1Q9BWS9 393 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 FZD3Q9NPG1 666 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ATAD3AQ9NVI7 634 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 TAC3Q9UHF0 121 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ADAMTS6Q9UKP5 1117 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 OR1A2Q9Y585 309 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 DPPA5A6NC42 116 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 PRORSD1PA6NEY8 169 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 H3BQ06 376 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 MANBAO00462 879 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 HNRNPRO43390 633 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 DDX5P17844 614 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 VARSP26640 1264 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CCR7P32248 378 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ACTR1BP42025 376 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 CTSCP53634 463 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 ACTR1AP61163 376 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 RUNX3Q13761 415 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 GPNMBQ14956 572 aa6.95□□□□□ -1.3
TGFBR3-202ENST00000370399 SLC5A9Q2M3M2 681 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms