RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 B3GNT8Q7Z7M8 397 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
SSR4-202ENST00000370085 FBXO39Q8N4B4 442 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 PAFAH2Q99487 392 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 OLFM1Q99784 485 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 MCMBPQ9BTE3 642 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 POLR1BQ9H9Y6 1135 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 PPCSQ9HAB8 311 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 PARVBQ9HBI1 364 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 ZNF180Q9UJW8 692 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 TLK1Q9UKI8 766 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 WASF3Q9UPY6 502 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 ICKQ9UPZ9 632 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 SPEGQ15772 3267 aa13.35□□□□□ -0.27
SSR4-202ENST00000370085 GFYI3L273 518 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 MYO1CO00159 1063 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 PLD2O14939 933 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 FKBP9O95302 570 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 TOP3BO95985 862 aaKnown RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 CHRM5P08912 532 aaPredicted RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 ENO2P09104 434 aaPredicted RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 SPINK2P20155 84 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 CDH3P22223 829 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 MPSTP25325 297 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 BDKRB1P46663 353 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 LSSP48449 732 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 SERPINB8P50452 374 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 PDX1P52945 283 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 GFERP55789 205 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 VSNL1P62760 191 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 TIAL1Q01085 375 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSR4-202ENST00000370085 SLC29A2Q14542 456 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 NAA25Q14CX7 972 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 C3orf38Q5JPI3 329 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 TMTC4Q5T4D3 741 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 MROH9Q5TGP6 573 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 TMEM164Q5U3C3 297 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 FAM92BQ6ZTR7 304 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 PRSS42Q7Z5A4 293 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 OR2L8Q8NGY9 312 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 INTS7Q9NVH2 962 aaKnown RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 FETUBQ9UGM5 382 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSR4-202ENST00000370085 POMT2Q9UKY4 750 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 PLAGL1Q9UM63 463 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 RUVBL2Q9Y230 463 aaKnown RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 LOXL2Q9Y4K0 774 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
SSR4-202ENST00000370085 V9GYY5 206 aaPredicted RBP13.34□□□□□ -0.27
SSR4-202ENST00000370085 A8MU76 341 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ARHGEF33A8MVX0 844 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ISM1B1AKI9 464 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 BTN3A1O00481 513 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 FAM155BO75949 473 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
SSR4-202ENST00000370085 MYBL2P10244 700 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 TYK2P29597 1187 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 SLC26A3P40879 764 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 AP1S2P56377 157 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ATP6V0D1P61421 351 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 GABREP78334 506 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 CFHR1Q03591 330 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 FOXR1Q6PIV2 292 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 CYHR1Q6ZMK1 362 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 TMPRSS9Q7Z410 1059 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ARHGAP22Q7Z5H3 698 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 FAM129CQ86XR2 697 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ADGRF3Q8IZF5 1079 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 RCBTB1Q8NDN9 531 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 HMGCLL1Q8TB92 370 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ATL1Q8WXF7 558 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 SLC12A9Q9BXP2 914 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 DERL2Q9GZP9 239 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ZNF768Q9H5H4 540 aaKnown RBP13.33□□□□□ -0.28
SSR4-202ENST00000370085 CAB39LQ9H9S4 337 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 SOHLH2Q9NX45 425 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ACTR10Q9NZ32 417 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 TMEM9Q9P0T7 183 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 CTNNAL1Q9UBT7 734 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 NOVA2Q9UNW9 492 aaKnown RBP13.33□□□□□ -0.28
SSR4-202ENST00000370085 SATB2Q9UPW6 733 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.28
SSR4-202ENST00000370085 ANKRD12Q6UB98 2062 aa13.32□□□□□ -0.28
SSR4-202ENST00000370085 A0A087X1B8 175 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms