RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GLIS1Q8NBF1 620 aa12.65□□□□□ -0.39
PTPRK-207ENST00000368226 PIGXQ8TBF5 258 aa12.65□□□□□ -0.39
PTPRK-207ENST00000368226 ANKHQ9HCJ1 492 aa12.65□□□□□ -0.39
PTPRK-207ENST00000368226 PCDHGA11Q9Y5H2 935 aa12.65□□□□□ -0.39
PTPRK-207ENST00000368226 TNFRSF10BO14763 440 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CCNB2O95067 398 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 GJB5O95377 273 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RLN1P04808 185 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 ATP1B2P14415 290 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CLCN7P51798 805 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RFTN1Q14699 578 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CLEC12AQ5QGZ9 265 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RANBP3LQ86VV4 465 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 OMA1Q96E52 524 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 MYADML2A6NDP7 307 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 HAT1O14929 419 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CAMK1Q14012 370 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 OLFML1Q6UWY5 402 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 SLC13A3Q8WWT9 602 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 BTBD1Q9H0C5 482 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PCDHAC1Q9H158 963 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 DMTF1Q9Y222 760 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 UBE2QL1A1L167 161 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 INMTO95050 263 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 HOXC12P31275 282 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 VIPR1P32241 457 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CAPGP40121 348 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PREPP48147 710 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 DENND5AQ6IQ26 1287 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 ACDQ96AP0 544 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RBM4BQ9BQ04 359 aaKnown RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CCM2Q9BSQ5 444 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 GABRDO14764 452 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 PI15O43692 258 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 F2P00734 622 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 IL18R1Q13478 541 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 OR10H4Q8NGA5 316 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 SLC35F5Q8WV83 523 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 NCSTNQ92542 709 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 RBCK1Q9BYM8 510 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 ZNF395Q9H8N7 513 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-207ENST00000368226 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 NID2Q14112 1375 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 ABCC6O95255 1503 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
PTPRK-207ENST00000368226 MYOCOSA0A1B0GUC4 107 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 M0R2N6 131 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
PTPRK-207ENST00000368226 THRBP10828 461 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 MEF2AQ02078 507 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-207ENST00000368226 RGS21Q2M5E4 152 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 OR10Q1Q8NGQ4 319 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 BADQ92934 168 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 FEM1AQ9BSK4 669 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 PLEKHA1Q9HB21 404 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TVP23BQ9NYZ1 205 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 A0A1W2PRB8 838 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 PRMT3O60678 531 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 B4GALT2O60909 372 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 GADD45GO95257 159 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 HAPLN1P10915 354 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-207ENST00000368226 APLP1P51693 650 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TARDBPQ13148 414 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TOR1AIP1Q5JTV8 583 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 LRRTM4Q86VH4 590 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 PHC3Q8NDX5 983 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 PAAF1Q9BRP4 392 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 SLC39A3Q9BRY0 314 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 TMEM150CB9EJG8 249 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 PIGRP01833 764 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 RAB8AP61006 207 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 ID2Q02363 134 aa12.63□□□□□ -0.39
PTPRK-207ENST00000368226 ANKRD26P1Q6NSI1 321 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms