RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RBM41Q96IZ5 413 aaKnown RBP14.03□□□□□ -0.16
VAMP4-202ENST00000367740 OR2A14Q96R47 310 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 FERD3LQ96RJ6 166 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 CRB3Q9BUF7 120 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 TSPAN10Q9H1Z9 355 aaPredicted RBP14.03□□□□□ -0.16
VAMP4-202ENST00000367740 FANCLQ9NW38 375 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 KCNN3Q9UGI6 736 aa14.03□□□□□ -0.16
VAMP4-202ENST00000367740 KLHL33A6NCF5 533 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 OR5H15A6NDH6 313 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 VSTM2BA6NLU5 285 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 E9PLN8 166 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 FAM227AF5H4B4 570 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 KCNK1O00180 336 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SGTAO43765 313 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 CELA2AP08217 269 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 PIM1P11309 404 aaPredicted RBP14.02□□□□□ -0.17
VAMP4-202ENST00000367740 COX6A1P12074 109 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 MSX1P28360 303 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 AKT1P31749 480 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SPAM1P38567 509 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SLC25A11Q02978 314 aaKnown RBP14.02□□□□□ -0.17
VAMP4-202ENST00000367740 PPP2R5EQ16537 467 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 CCDC122Q5T0U0 273 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SARM1Q6SZW1 724 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 MLKLQ8NB16 471 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 IMP4Q96G21 291 aaKnown RBP14.02□□□□□ -0.17
VAMP4-202ENST00000367740 LINC00615Q96LM1 132 aaPredicted RBP14.02□□□□□ -0.17
VAMP4-202ENST00000367740 ALPK1Q96QP1 1244 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 VKORC1Q9BQB6 163 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SYT11Q9BT88 431 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 HGH1Q9BTY7 390 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 SMOXQ9NWM0 555 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 COQ3Q9NZJ6 369 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 PLCL2Q9UPR0 1127 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 ICKQ9UPZ9 632 aa14.02□□□□□ -0.17
VAMP4-202ENST00000367740 MXRA5Q9NR99 2828 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 NSG1A0A0A6YYJ2 146 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 A0A0J9YY10 115 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 GLYATL1P3A0A0U1RQE8 302 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 NKX2-6A6NCS4 301 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 DSCR3O14972 297 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 ZWINTO95229 277 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 BMP10O95393 424 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 SERPINA7P05543 415 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 PYGMP11217 842 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 MSH3P20585 1137 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 NSG1P42857 185 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 MEOX1P50221 254 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 KLC1Q07866 573 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 BCL7AQ4VC05 210 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 ATP13A4Q4VNC1 1196 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 KRTCAP3Q53RY4 240 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CCDC183Q5T5S1 534 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CES4AQ5XG92 561 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 ATG9BQ674R7 924 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 DOLPP1Q86YN1 238 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CHERPQ8IWX8 916 aaKnown RBP14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CFAP206Q8IYR0 622 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 PHC3Q8NDX5 983 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 FAM71BQ8TC56 605 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 HM13Q8TCT9 377 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 TADA1Q96BN2 335 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CCM2Q9BSQ5 444 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CEP41Q9BYV8 373 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 CBX8Q9HC52 389 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 SPHK1Q9NYA1 384 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 EURLQ9NYK6 297 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 PPT2Q9UMR5 302 aa14.01□□□□□ -0.17
VAMP4-202ENST00000367740 UQCRHP07919 91 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 ABOP16442 354 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 CARSP49589 748 aaKnown RBP14□□□□□ -0.17
VAMP4-202ENST00000367740 ARSFP54793 590 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 GBE1Q04446 702 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 PRKG2Q13237 762 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 ITGA9Q13797 1035 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 DSG2Q14126 1118 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 KRT81Q14533 505 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 NOMO1Q15155 1222 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 ZNF766Q5HY98 468 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 NDUFAF7Q7L592 441 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 NLRP9Q7RTR0 991 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 DTWD1Q8N5C7 304 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 METTL27Q8N6F8 245 aaPredicted RBP14□□□□□ -0.17
VAMP4-202ENST00000367740 OR52A5Q9H2C5 316 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 ZNF358Q9NW07 568 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 DNAJB12Q9NXW2 375 aaKnown RBP14□□□□□ -0.17
VAMP4-202ENST00000367740 IL17CQ9P0M4 197 aa14□□□□□ -0.17
VAMP4-202ENST00000367740 LUC7L2Q9Y383 392 aaKnown RBP14□□□□□ -0.17
VAMP4-202ENST00000367740 NPIPA5E9PKD4 350 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 NDST3O95803 873 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 HOXD4P09016 255 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 EEF1GP26641 437 aaKnown RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 OR1D4P47884 311 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 IFI35P80217 286 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 FANCCQ00597 558 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 HSF1Q00613 529 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 SLC10A2Q12908 348 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 MYBPHQ13203 477 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms