RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TAS2R42Q7RTR8 314 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 B3GNT8Q7Z7M8 397 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 SERPINA9Q86WD7 417 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 DCP2Q8IU60 420 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 RBFAQ8N0V3 343 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PPP1R14CQ8TAE6 165 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 HEXDCQ8WVB3 486 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 KCNJ9Q92806 393 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ULK4Q96C45 1275 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 BMFQ96LC9 184 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 CDH19Q9H159 772 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 FAM96AQ9H5X1 160 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ASB8Q9H765 288 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 SYNDIG1Q9H7V2 258 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PCDH12Q9NPG4 1184 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 OXSMQ9NWU1 459 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 XPR1Q9UBH6 696 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 ANAPC2Q9UJX6 822 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 PPM1HQ9ULR3 514 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 MED16Q9Y2X0 877 aa11.01□□□□□ -0.65
CSNK1E-202ENST00000366216 TMEM114B3SHH9 223 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 H3BM21 787 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 PSMD11O00231 422 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 RAD51BO15315 384 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 NVLO15381 856 aaKnown RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 SPINT1O43278 529 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 AQP9O43315 295 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 VPS26AO75436 327 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CSF2P04141 144 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 HGFP14210 728 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 NME1P15531 152 aaKnown RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF37AP17032 561 aaPredicted RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 XPAP23025 273 aaPredicted RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 ITGB7P26010 798 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 ACRV1P26436 265 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 RPIAP49247 311 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 HNRNPH2P55795 449 aaKnown RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 DNAJB13P59910 316 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 ITGA9Q13797 1035 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 FZD2Q14332 565 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CTSL3PQ5NE16 218 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 LIPMQ5VYY2 423 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CES4AQ5XG92 561 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 SEL1L3Q68CR1 1132 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 UGT3A1Q6NUS8 523 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 ERAP2Q6P179 960 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 NEK5Q6P3R8 708 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 BORAQ6PGQ7 559 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 YTHDF3Q7Z739 585 aaKnown RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 TTC7BQ86TV6 843 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 PIM3Q86V86 326 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CRLF3Q8IUI8 442 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 NKAPQ8N5F7 415 aaKnown RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 GPR26Q8NDV2 337 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 ANKRD49Q8WVL7 239 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 NAT6Q93015 286 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC126Q96EE4 140 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC3Q9BQI4 270 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 BOCQ9BWV1 1114 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 TRIM55Q9BYV6 548 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 STRADBQ9C0K7 418 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 DERL2Q9GZP9 239 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 TCEAL2Q9H3H9 227 aaPredicted RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 CRLS1Q9UJA2 301 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 GNPTGQ9UJJ9 305 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 TUBD1Q9UJT1 453 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 SHANK1Q9Y566 2161 aa11□□□□□ -0.65
CSNK1E-202ENST00000366216 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
CSNK1E-202ENST00000366216 POM121BA6NF01 834 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 A8MX80 341 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 C1QTNF3-AMACRE9PGA6 284 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 F8W8V4 182 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 TMX2-CTNND1H3BSU7 103 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 NTN3O00634 580 aaPredicted RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 OR1I1O60431 355 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 DNAJC6O75061 913 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 SNUPNO95149 360 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 CD1DP15813 335 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 ATP5F1P24539 256 aaPredicted RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 MMP12P39900 470 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 GLRBP48167 497 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 SLC1A6P48664 564 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 POLE2P56282 527 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 RIPPLY3P57055 190 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 ABCE1P61221 599 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 ATP6V0D1P61421 351 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 RALGDSQ12967 914 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 MACC1Q6ZN28 852 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 PARS2Q7L3T8 475 aaKnown RBP10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 ISCA2Q86U28 154 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 PARGQ86W56 976 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 HORMAD1Q86X24 394 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 NRSN1Q8IZ57 195 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 NXPE1Q8N323 547 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 RHEBL1Q8TAI7 183 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 C10orf82Q8WW14 230 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 GLMNQ92990 594 aa10.99□□□□□ -0.65
CSNK1E-202ENST00000366216 PPP1R16AQ96I34 528 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms