RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 SCAMP1O15126 338 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 POLR3GO15318 223 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 BIRC5O15392 142 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 YKT6O15498 198 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 FFAR2O15552 330 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 KDM1AO60341 852 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PSIP1O75475 530 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 MATN4O95460 622 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 FUCA1P04066 466 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 HIST1H2AGP0C0S8 130 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 DHRS4L1P0CG22 281 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TPBGLP0DKB5 382 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 GFAPP14136 432 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC2A4P14672 509 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 JUPP14923 745 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 CPA3P15088 417 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 HIST1H2ADP20671 130 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 RPL10P27635 214 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PDHA2P29803 388 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ETV4P43268 484 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 BDKRB1P46663 353 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ARRB1P49407 418 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PRKAA2P54646 552 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 AP1S2P56377 157 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 NFKB2Q00653 900 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 CTBSQ01459 385 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 MPP2Q14168 576 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ELOCQ15369 112 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TCEA2Q15560 299 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TGFBIQ15582 683 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PPP1R3AQ16821 1122 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ZNF542PQ5EBM4 170 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PRRT3Q5FWE3 981 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TTC23LQ6PF05 361 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 IL27RAQ6UWB1 636 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SBSNQ6UWP8 590 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 WASH2PQ6VEQ5 465 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 UBE2R2Q712K3 238 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TAF8Q7Z7C8 310 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 GKN2Q86XP6 184 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SPATS2Q86XZ4 545 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 DCUN1D3Q8IWE4 304 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TCAIMQ8N3R3 496 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 RAB42Q8N4Z0 105 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 CFAP61Q8NHU2 1237 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PPP1R14CQ8TAE6 165 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 MCOLN3Q8TDD5 553 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 GPBAR1Q8TDU6 330 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 DENND1AQ8TEH3 1009 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ASB11Q8WXH4 323 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC39A7Q92504 469 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 HIST1H2AHQ96KK5 128 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 RMDN2Q96LZ7 410 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ATOH8Q96SQ7 321 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 HIST1H2AJQ99878 128 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 EGFL8Q99944 293 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 H2AFJQ9BTM1 129 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 LRRC61Q9BV99 259 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC12A9Q9BXP2 914 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 SEMA4CQ9C0C4 833 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 WWP1Q9H0M0 922 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 C12orf65Q9H3J6 166 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ERVMER34-1Q9H9K5 563 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 RDH14Q9HBH5 336 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PARVBQ9HBI1 364 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 WASH6PQ9NQA3 447 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ARL15Q9NXU5 204 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 CD274Q9NZQ7 290 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PNMA8BQ9ULN7 279 aaPredicted RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 PSMD13Q9UNM6 376 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 ASF1AQ9Y294 204 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 HEBP2Q9Y5Z4 205 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 AK5Q9Y6K8 562 aa6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 LRP4O75096 1905 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 WDR91A4D1P6 747 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 NCF1BA6NI72 391 aaPredicted RBP6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 A8MT66 165 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 NCF1CA8MVU1 366 aaPredicted RBP6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 ARHGEF33A8MVX0 844 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 TARM1B6A8C7 271 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 G3V2L1 256 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 STX16-NPEPL1H3BU86 382 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 GFYI3L273 518 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 UBXN8O00124 270 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 STX16O14662 325 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 TNFSF14O43557 240 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 DFNA5O60443 496 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 SDC3O75056 442 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 IPO13O94829 963 aaKnown RBP6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 C1orf105O95561 183 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 CER1O95813 267 aa6.59□□□□□ -1.35
RNU1-55P-201ENST00000365510 GUCA1CO95843 209 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms