RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ZFP69Q49AA0 526 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 Q6ZNX1 250 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 PTCHD4Q6ZW05 846 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 ARMC8Q8IUR7 673 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 PELI3Q8N2H9 469 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 Q8N9G6 341 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TMEM203Q969S6 136 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 DERL2Q9GZP9 239 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TUBB1Q9H4B7 451 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 ZDHHC6Q9H6R6 413 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 LSM7Q9UK45 103 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 GJD2Q9UKL4 321 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF510Q9Y2H8 683 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CLIC1O00299 241 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 SAP18O00422 153 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OR1D2P34982 312 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 MAGEA12P43365 314 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 NFKB2Q00653 900 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CHIT1Q13231 466 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 KRT33BQ14525 404 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF57Q68EA5 555 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OR2T5Q6IEZ7 315 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TTC23LQ6PF05 361 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 EIF3MQ7L2H7 374 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 SVOPLQ8N434 492 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OR2T29Q8NH02 315 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 HDAC2Q92769 488 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 YTHDF1Q9BYJ9 559 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 RBM38Q9H0Z9 239 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TLR6Q9Y2C9 796 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 PCDHGA11Q9Y5H2 935 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TBKBP1A7MCY6 615 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 M0R129 80 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 CNMDO75829 334 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 HTR1EP28566 365 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ZXDBP98169 803 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 MAP2K5Q13163 448 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 KRR1Q13601 381 aaKnown RBP13.37□□□□□ -0.27
SGMS1-202ENST00000361781 SEMA3AQ14563 771 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 TPRG1LQ5T0D9 272 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 HECTD3Q5T447 861 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 RGL4Q8IZJ4 473 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 C19orf18Q8NEA5 215 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 COPS8Q99627 209 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 PAK1IP1Q9NWT1 392 aaPredicted RBP13.37□□□□□ -0.27
SGMS1-202ENST00000361781 NUDT4Q9NZJ9 180 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 KRT87PA6NCN2 255 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
SGMS1-202ENST00000361781 FDXRP22570 491 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 FSHRP23945 695 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 HOXD12P35452 270 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ATP4BP51164 291 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 FOXM1Q08050 763 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 TCEA2Q15560 299 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 DSG4Q86SJ6 1040 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 TRIM69Q86WT6 500 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 COQ7Q99807 217 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 CCNB1IP1Q9NPC3 277 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ANKRD66B4E2M5 251 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 H0YAE9 185 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 OR10H3O60404 316 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ESR1P03372 595 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 DNTTP04053 509 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ENGP17813 658 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 RAB25P57735 213 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
SGMS1-202ENST00000361781 PON2Q15165 354 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 KDELC1Q6UW63 502 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF280BQ86YH2 543 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 TMEM159Q96B96 161 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 OMA1Q96E52 524 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
SGMS1-202ENST00000361781 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 ANKDD1BA6NHY2 528 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 MYL12BO14950 172 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 LDB2O43679 373 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 EEDO75530 441 aaKnown RBP13.36□□□□□ -0.27
SGMS1-202ENST00000361781 F2P00734 622 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 CHRNA1P02708 482 aa13.36□□□□□ -0.27
SGMS1-202ENST00000361781 CSF2P04141 144 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms