RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TOP3AQ13472 1001 aaPredicted RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 LRP8Q14114 963 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 LARP4Q71RC2 724 aaKnown RBP eCLIP12□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF366Q8N895 744 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF461Q8TAF7 563 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ZUFSPQ96AP4 578 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 TMIGD2Q96BF3 282 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 PLEKHA8Q96JA3 519 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ARNT2Q9HBZ2 717 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 CMTM6Q9NX76 183 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ZDHHC7Q9NXF8 308 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 SRRDQ9UH36 339 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 RAPGEFL1Q9UHV5 662 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 IFRD1O00458 451 aaPredicted RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF195O14628 629 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 GPR1P46091 355 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 RPL34P49207 117 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 FOXM1Q08050 763 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 TRAF3Q13114 568 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 RFX4Q33E94 735 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 OR4F3Q6IEY1 312 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 OTOP2Q7RTS6 562 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF605Q86T29 641 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 CMTR2Q8IYT2 770 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 CENPSQ8N2Z9 138 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 PACRGLQ8N7B6 248 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 TRPV1Q8NER1 839 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 PEX13Q92968 403 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 NODALQ96S42 347 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 WRAP53Q9BUR4 548 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 BOCQ9BWV1 1114 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 SMG9Q9H0W8 520 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 RNF186Q9NXI6 227 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 DNAJB9Q9UBS3 223 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 DHRS7Q9Y394 339 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ADH1AP07327 375 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ANXA4P09525 319 aaPredicted RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 DDX5P17844 614 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 MAGEA12P43365 314 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 PRKAG1P54619 331 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 MYBPC1Q00872 1141 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ALDH6A1Q02252 535 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 KRR1Q13601 381 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 CEP78Q5JTW2 689 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 CYP2U1Q7Z449 544 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 HIPK1Q86Z02 1210 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 SLC7A5P1Q8MH63 180 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 GLB1L3Q8NCI6 653 aaPredicted RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 ACDQ96AP0 544 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 C12orf43Q96C57 262 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF382Q96SR6 550 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 AMBNQ9NP70 447 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 RPRD1BQ9NQG5 326 aaKnown RBP12□□□□□ -0.49
COL20A1-201ENST00000358894 RAB23Q9ULC3 237 aa12□□□□□ -0.49
COL20A1-201ENST00000358894 ALOX5P09917 674 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 IL12RB1P42701 662 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 EMX2Q04743 252 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF846Q147U1 533 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ABRAXAS2Q15018 415 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 MINDY1Q8N5J2 469 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ISL2Q96A47 359 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 DMRTB1Q96MA1 342 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 MUS81Q96NY9 551 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 FAIMQ9NVQ4 179 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ANKDD1BA6NHY2 528 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 TMEM88BA6NKF7 163 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 TRIM24O15164 1050 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 GRM6O15303 877 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 GSRP00390 522 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 GPX3P22352 226 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 SLC6A4P31645 630 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 TUBA4AP68366 448 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 SPIBQ01892 262 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 RELAQ04206 551 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 SEMA3AQ14563 771 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 PTCHD3Q3KNS1 767 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ZBED5Q49AG3 693 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 Q6ZVU0 165 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 AHSA2Q719I0 299 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 KRTCAP2Q8N6L1 136 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 OR2AP1Q8NGE2 309 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 STARD8Q92502 1023 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 TEX12Q9BXU0 123 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 CAPN10Q9HC96 672 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 PCTPQ9UKL6 214 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ASF1AQ9Y294 204 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 SH3PXD2BA1X283 911 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ATXN1LP0C7T5 689 aaKnown RBP11.99□□□□□ -0.49
COL20A1-201ENST00000358894 OXTRP30559 389 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 ERVPABLB-1P60509 514 aa11.99□□□□□ -0.49
COL20A1-201ENST00000358894 GALNT1Q10472 559 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms