RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CHRNA1P02708 482 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 RB1P06400 928 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CD2P06729 351 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 RGS8P57771 180 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PCLAFQ15004 111 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HLA-DQA1Q5Y7H0 255 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 LCLAT1Q6UWP7 414 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 DCDC5Q6ZRR9 648 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CPNE9Q8IYJ1 553 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SDR16C5Q8N3Y7 309 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ATF5Q9Y2D1 282 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HTR2AP28223 471 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 RORAP35398 523 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GPX6P59796 221 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SNRPD1P62314 119 aaKnown RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PIGZQ86VD9 579 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 Q8N402 240 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 RHBDF1Q96CC6 855 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ELP3Q9H9T3 547 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TRPV4Q9HBA0 871 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 AMBNQ9NP70 447 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HCN2Q9UL51 889 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 FAM159BA6NKW6 160 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CD40LGP29965 261 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 GSK3BP49841 420 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PLD1Q13393 1074 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 STYXQ8WUJ0 223 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 SLC45A3Q96JT2 553 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 BPIFA1Q9NP55 256 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 CLCA1A8K7I4 914 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM63AO94886 807 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PON2Q15165 354 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 TCEA2Q15560 299 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PIGGQ5H8A4 983 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 OR10G2Q8NGC3 310 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 ACTR6Q9GZN1 396 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 AKTIPQ9H8T0 292 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 HCN3Q9P1Z3 774 aa8.61□□□□□ -1.03
COL6A6-201ENST00000358511 PPM1BO75688 479 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 OAS1P00973 400 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF3P17036 446 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 OR5B17Q8NGF7 314 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 LPIN3Q9BQK8 851 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 RSPH9Q9H1X1 276 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 SACM1LQ9NTJ5 587 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 RGPD5Q99666 1765 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CD48P09326 243 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MAXP61244 160 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ELAVL2Q12926 359 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MEP1AQ16819 746 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF367Q7RTV3 350 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 SLC15A4Q8N697 577 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 JOSD2Q8TAC2 188 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TRIM43Q96BQ3 446 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 HYLS1Q96M11 299 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CGREF1Q99674 301 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 MYCLP1P12525 358 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 IMPDH1P20839 514 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 RYKP34925 604 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 LGR4Q9BXB1 951 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 FLRT1Q9NZU1 646 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 COPZ2Q9P299 210 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 A0A1B0GVG6 124 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 BTBD19C9JJ37 291 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 UNGP13051 313 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 GLUD2P49448 558 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PPP5CP53041 499 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PRR5P85299 388 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 ARHGEF4Q9NR80 690 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TRPV2Q9Y5S1 764 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TRAV6A0A075B6T7 132 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PPP3R1P63098 170 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PARP15Q460N3 678 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM236Q5W0B7 351 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 DCBLD1Q8N8Z6 715 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM169Q96HH4 297 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 AHCYL2Q96HN2 611 aaKnown RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 GLS2Q9UI32 602 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 XKRYO14609 159 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 SMARCD3Q6STE5 483 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 PIAS4Q8N2W9 510 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 AP2M1Q96CW1 435 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 B3GNT3Q9Y2A9 372 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 CDH10Q9Y6N8 788 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 TP53BP1Q12888 1972 aaPredicted RBP8.6□□□□□ -1.03
COL6A6-201ENST00000358511 AKAP11Q9UKA4 1901 aa8.6□□□□□ -1.03
COL6A6-201ENST00000358511 HOXA2O43364 376 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms