RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RBL1P28749 1068 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CORO7P57737 925 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 SLC6A3Q01959 620 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 HAGHLQ6PII5 290 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 ERN2Q76MJ5 926 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 PDPRQ8NCN5 879 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 BPIFB1Q8TDL5 484 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TCP10LQ8TDR4 215 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CDT1Q9H211 546 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 IKZF4Q9H2S9 585 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 HEBP2Q9Y5Z4 205 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 PIM1P11309 404 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 C1QTNF8P60827 252 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CAP1Q01518 475 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 AIMP2Q13155 320 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 CTBP1Q13363 440 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TMEM220Q6QAJ8 160 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 VHLLQ6RSH7 139 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 OR4L1Q8NH43 312 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CYB5D2Q8WUJ1 264 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 ABHD16BQ9H3Z7 469 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 ZNF701Q9NV72 531 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 LYARQ9NX58 379 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 MTMR10Q9NXD2 777 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 H7C1Q1 480 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 RTCAO00442 366 aaKnown RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 PRKCGP05129 697 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 GSTM4Q03013 218 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 DMRTB1Q96MA1 342 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 TUBGCP5Q96RT8 1024 aa9.6□□□□□ -0.87
CHD3-202ENST00000358181 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
CHD3-202ENST00000358181 CASZ1Q86V15 1759 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 FAM240BA0A1B0GVZ2 78 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 GRIA4P48058 902 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 CASP5P51878 434 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 COPS8Q99627 209 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 TREX2Q9BQ50 279 aaPredicted RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 CDH19Q9H159 772 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 ARHGEF4Q9NR80 690 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 TRPS1Q9UHF7 1281 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 BLOC1S5-TXNDC5H3BN57 136 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 NDUFS4O43181 175 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 ENSAO43768 121 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 CABYRO75952 493 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 VAMP1P23763 118 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 BRCC3P46736 316 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LRRC32Q14392 662 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 FASTKD3Q14CZ7 662 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 GRK1Q15835 563 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 OTOP1Q7RTM1 612 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 TMEM192Q8IY95 271 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 ZBTB2Q8N680 514 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 GATSQ8NAP1 163 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 TNFRSF25Q93038 417 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 TM9SF2Q99805 663 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 PELOQ9BRX2 385 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD3-202ENST00000358181 DNTTIP1Q9H147 329 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 CDC42EP4Q9H3Q1 356 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 SERTAD4Q9NUC0 356 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 GRHL1Q9NZI5 618 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 KCNN3Q9UGI6 736 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 PLAGL1Q9UM63 463 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LAMTOR5O43504 91 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LRIG2O94898 1065 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LGALS2P05162 132 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LPOP22079 712 aaPredicted RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 MTHFRP42898 656 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 RPL6Q02878 288 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 RHEBQ15382 184 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 RUNDC3AQ59EK9 446 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 GPR157Q5UAW9 335 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 LRRC66Q68CR7 880 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 KIAA1161Q6NSJ0 714 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 CRTC1Q6UUV9 634 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 FAM183BPQ6ZVS7 135 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 NDNFQ8TB73 568 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 NDRG1Q92597 394 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 ZFP37Q9Y6Q3 630 aaPredicted RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 RNF13O43567 381 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 ACTR1BP42025 376 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 CDH4P55283 916 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 AP3S2P59780 193 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 SNRPFP62306 86 aaKnown RBP9.59□□□□□ -0.87
CHD3-202ENST00000358181 DACT2Q5SW24 774 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 NEPROQ6NW34 567 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 AMER2Q8N7J2 671 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 DPF1Q92782 380 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 ADAP2Q9NPF8 381 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 A0A0A6YYH2 397 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 A0A1W2PQJ5 194 aa9.59□□□□□ -0.87
CHD3-202ENST00000358181 A6NJ64 397 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms