RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ALDH9A1P49189 494 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 CLCN3P51790 818 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 CLDN20P56880 219 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 GPR85P60893 370 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 BTG1P62324 171 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 DBPQ10586 325 aaPredicted RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 PWP1Q13610 501 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 MTMR1Q13613 665 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 GRB7Q14451 532 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 BAK1Q16611 211 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 SYT16Q17RD7 645 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 PARP14Q460N5 1801 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 PCID2Q5JVF3 399 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 KIAA1614Q5VZ46 1190 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 RAP1GAP2Q684P5 730 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 NAPEPLDQ6IQ20 393 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 XRRA1Q6P2D8 792 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 GPR149Q86SP6 731 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 TLK2Q86UE8 772 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 TMC8Q8IU68 726 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 MFSD6LQ8IWD5 586 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 NIM1KQ8IY84 436 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 CYP4Z2PQ8N1L4 340 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 ZNF557Q8N988 423 aaPredicted RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 ZNF548Q8NEK5 533 aaPredicted RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 ANKRD49Q8WVL7 239 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 ST8SIA4Q92187 359 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 KHSRPQ92945 711 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCR9-201ENST00000355983 RBPMSQ93062 196 aaKnown RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 FBXW5Q969U6 566 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 TUBGCP3Q96CW5 907 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 TEPSINQ96N21 525 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 ZNF583Q96ND8 569 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 SERPINB11Q96P15 392 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 LGMNQ99538 433 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 COPS4Q9BT78 406 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 C11orf54Q9H0W9 315 aaPredicted RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 MMP28Q9H239 520 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 PIGUQ9H490 435 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 CARS2Q9HA77 564 aaKnown RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 DCAF13Q9NV06 445 aaKnown RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 SETD4Q9NVD3 440 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 LYARQ9NX58 379 aaKnown RBP7.54□□□□□ -1.2
CCR9-201ENST00000355983 POLG2Q9UHN1 485 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 PCDHA10Q9Y5I2 948 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 CACNG2Q9Y698 323 aa7.54□□□□□ -1.2
CCR9-201ENST00000355983 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 K7ERI5 159 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 SH3BP5O60239 455 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 KPNA6O60684 536 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 FAM157BP0CG42 384 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 GRK5P34947 590 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 KIR2DL3P43628 341 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 BRCC3P46736 316 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 TAS2R39P59534 338 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 UBXN2AP68543 259 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 EN1Q05925 392 aaPredicted RBP7.53□□□□□ -1.2
CCR9-201ENST00000355983 NFIAQ12857 509 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
CCR9-201ENST00000355983 NKG7Q16617 165 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 CDO1Q16878 200 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 XKR7Q5GH72 579 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 CPZQ66K79 652 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 CLEC6AQ6EIG7 209 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 PLET1Q6UQ28 207 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 UTS2BQ765I0 119 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 PDZD4Q76G19 769 aaPredicted RBP7.53□□□□□ -1.2
CCR9-201ENST00000355983 TMEM179BQ7Z7N9 219 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 DNAAF3Q8N9W5 541 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 ZNF675Q8TD23 568 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 TRPM4Q8TD43 1214 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
CCR9-201ENST00000355983 FAM149B1Q96BN6 582 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 SGTBQ96EQ0 304 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 TMEM74Q96NL1 305 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 TMEM209Q96SK2 561 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 MARVELD1Q9BSK0 173 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 MRIQ9BWK5 157 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 HEXA-AS1Q9H8Q6 139 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 EMC7Q9NPA0 242 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 NEMP2A6NFY4 417 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 CLCA1A8K7I4 914 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 PRSS44E7EML9 344 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 MFSD11O43934 449 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 KIAA0513O60268 411 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 CACNG3O60359 315 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 SNAPINO95295 136 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 LDOC1O95751 146 aaPredicted RBP7.53□□□□□ -1.2
CCR9-201ENST00000355983 COL6A1P12109 1028 aa7.53□□□□□ -1.2
CCR9-201ENST00000355983 SLC2A4P14672 509 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms