RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MIER2Q8N344 545 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 OR4L1Q8NH43 312 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ST8SIA2Q92186 375 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PEX13Q92968 403 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TEX37Q96LM6 180 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TUBA1CQ9BQE3 449 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UCK2Q9BZX2 261 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 POLR1EQ9GZS1 481 aaKnown RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 ARNT2Q9HBZ2 717 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TMEM181Q9P2C4 612 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CD300AQ9UGN4 299 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ZNF99A8MXY4 864 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 FAM25AB3EWG3 89 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 FAM25CB3EWG5 89 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 FAM25GB3EWG6 89 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 BTN3A1O00481 513 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 HAT1O14929 419 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 HS6ST1O60243 411 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MTHFD2P13995 350 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CTGFP29279 349 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 NFYCQ13952 458 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 DSC3Q14574 896 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 LAPTM4AQ15012 233 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 KCNA10Q16322 511 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 RBBP7Q16576 425 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 IGSF11Q5DX21 431 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 FAM171A1Q5VUB5 890 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ZNF544Q6NX49 715 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MSANTD2Q6P1R3 559 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MRPL10Q7Z7H8 261 aaKnown RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 HORMAD1Q86X24 394 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PHC2Q8IXK0 858 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MCOLN3Q8TDD5 553 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 FAM193BQ96PV7 902 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 GPR21Q99679 349 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UQCC2Q9BRT2 126 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 RHNO1Q9BSD3 238 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ZBTB20Q9HC78 741 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 CD320Q9NPF0 282 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 HPS4Q9NQG7 708 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PRDM5Q9NQX1 630 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 CCM2LQ9NUG4 571 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 ARMC1Q9NVT9 282 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PAK1IP1Q9NWT1 392 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 QPCTLQ9NXS2 382 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 POLG2Q9UHN1 485 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 KLHL20Q9Y2M5 609 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 A0A0G2JMP0 313 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ISPDA4D126 451 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 MROH6A6NGR9 719 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SMLR1H3BR10 107 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ARHGEF9O43307 516 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 NDUFS3O75489 264 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 OR7A10O76100 309 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 CSF2P04141 144 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 DNAJB1P25685 340 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RRM2P31350 389 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RGRP47804 291 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ST13P50502 369 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 DBPQ10586 325 aaPredicted RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 CRHR2Q13324 411 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 PTPRNQ16849 979 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 GLYATQ6IB77 296 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SPESP1Q6UW49 350 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 ZNF555Q8NEP9 628 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 OR6F1Q8NGZ6 308 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SIPA1Q96FS4 1042 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SLC39A13Q96H72 371 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 PPP1R2P1Q96PQ5 205 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 MMP28Q9H239 520 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 AGPAT4Q9NRZ5 378 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 TMEM39AQ9NV64 488 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 TMEM248Q9NWD8 314 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 CMTM6Q9NX76 183 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 EHD3Q9NZN3 535 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ERVK-18Q9QC07 812 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ANAPC2Q9UJX6 822 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 TDRD15B5MCY1 1934 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 ZFC3H1O60293 1989 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 IQCF5A8MTL0 148 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 AKR7A2O43488 359 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 OR1I1O60431 355 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ZNF623O75123 536 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 NIPSNAP2O75323 286 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SERPINF2P08697 491 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 THRBP10828 461 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 LBPP18428 481 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 POLR2CP19387 275 aaPredicted RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 CRHBPP24387 322 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 KRT20P35900 424 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 IL12RB1P42701 662 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RPS24P62847 133 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 TIAL1Q01085 375 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMG6-202ENST00000354901 SNTA1Q13424 505 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms