RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CLDN8P56748 225 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 CPSF6Q16630 551 aaKnown RBP eCLIP21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 KREMEN2Q8NCW0 462 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 NUDT8Q8WV74 236 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 SELENOMQ8WWX9 145 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 HIC2Q96JB3 615 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 B4GALT6Q9UBX8 382 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 TMED5Q9Y3A6 229 aa21.74■■□□□ 1.07
NKX2-1-201ENST00000354822 ELOVL7A1L3X0 281 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 CXCL14O95715 111 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 EPORP19235 508 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 MAPK1P28482 360 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 GJA8P48165 433 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 RPS14P62263 151 aaKnown RBP21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 PLIN5Q00G26 463 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 HSPA14Q0VDF9 509 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 DMC1Q14565 340 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 ATG9BQ674R7 924 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 SUSD1Q6UWL2 747 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 GDPD4Q6W3E5 623 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 OR10A6Q8NH74 314 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 ACPTQ9BZG2 426 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 ELOVL6Q9H5J4 265 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 V9GYQ6 96 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 PTPRSQ13332 1948 aa21.73■■□□□ 1.07
NKX2-1-201ENST00000354822 NPIPB8E9PQR5 432 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 PDYNP01213 254 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 CYP2A7P20853 494 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 ALDH3A2P51648 485 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 AP1S2P56377 157 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 BRAT1Q6PJG6 821 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 NEK10Q6ZWH5 1172 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 USP51Q70EK9 711 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 L3MBTL4Q8NA19 623 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 ZNF548Q8NEK5 533 aaPredicted RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 MCOLN3Q8TDD5 553 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 SKA2Q8WVK7 121 aaPredicted RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 RMND5AQ9H871 391 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 NTN4Q9HB63 628 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 INVSQ9Y283 1065 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 SERTM1A2A2V5 107 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 WASH3PC4AMC7 463 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 CFAP99D6REC4 459 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 GFYI3L273 518 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 CYP2A6P11509 494 aaPredicted RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 PABPC1P11940 636 aaKnown RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 DDX6P26196 483 aaKnown RBP eCLIP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 SLC6A12P48065 614 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 ADARB1P78563 741 aaKnown RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 TMEM25Q86YD3 366 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 KRTCAP2Q8N6L1 136 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 FIG4Q92562 907 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 MTFMTQ96DP5 389 aaKnown RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 SMG9Q9H0W8 520 aaKnown RBP21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 KCNH6Q9H252 994 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 ADGRE2Q9UHX3 823 aa21.72■■□□□ 1.07
NKX2-1-201ENST00000354822 FGF19O95750 216 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ALBP02768 609 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ACPPP15309 386 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 RECQLP46063 649 aaPredicted RBP21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 BOP1Q14137 746 aaKnown RBP21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 RFLNAQ6ZTI6 216 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 NECAB2Q7Z6G3 386 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 SLC22A17Q8WUG5 538 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 DTNBP1Q96EV8 351 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 CMTM7Q96FZ5 175 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 SLCO3A1Q9UIG8 710 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 MAN2B2Q9Y2E5 1009 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 PCDHGA11Q9Y5H2 935 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 TRMUO75648 421 aaKnown RBP21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 AP2A2O94973 939 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 MT-ND1P03886 318 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ASLP04424 464 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 S100A3P33764 101 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ARSFP54793 590 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 AP1ARQ63HQ0 302 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 GPR141Q7Z602 305 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 FBXL20Q96IG2 436 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ITCHQ96J02 903 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 RDH12Q96NR8 316 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 ABCG8Q9H221 673 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 SLC25A37Q9NYZ2 338 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 DNAJB9Q9UBS3 223 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 TMPRSS11EQ9UL52 423 aa21.71■■□□□ 1.07
NKX2-1-201ENST00000354822 PLXNB3Q9ULL4 1909 aa21.7■■□□□ 1.07
NKX2-1-201ENST00000354822 KCNE1BA0A087WTH5 132 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 A0A096LPI6 279 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 TRBV5-3A0A0A0MS03 114 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 UPK1AO00322 258 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 SEC24DO94855 1032 aaPredicted RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 SNAP29O95721 258 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 HPRP00739 348 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 CDH15P55291 814 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 ZNF33BQ06732 778 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 DAG1Q14118 895 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 ZBED5Q49AG3 693 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 PYCR3Q53H96 274 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 LRIF1Q5T3J3 769 aa21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 ASTLQ6HA08 431 aaPredicted RBP21.7■■□□□ 1.06
NKX2-1-201ENST00000354822 LPCAT2Q7L5N7 544 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms