RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MICU2Q8IYU8 434 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 NXPE1Q8N323 547 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 PARP8Q8N3A8 854 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 LEMD2Q8NC56 503 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 OVCA2Q8WZ82 227 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 MBOAT4Q96T53 435 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 RETREG1Q9H6L5 497 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 GORASP2Q9H8Y8 452 aa19.11■□□□□ 0.65
COL13A1-201ENST00000354547 IFRD1O00458 451 aaPredicted RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 MITFO75030 526 aaPredicted RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CLDN9O95484 217 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 INHAP05111 366 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 IL6P05231 212 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 PFKLP17858 780 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CD70P32970 193 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 S100A3P33764 101 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 SPAM1P38567 509 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 MAD2L1Q13257 205 aaPredicted RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CTU2Q2VPK5 515 aaKnown RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 ATP13A5Q4VNC0 1218 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 RUNDC3AQ59EK9 446 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 FNDC8Q8TC99 324 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 IGSF21Q96ID5 467 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 TMEM175Q9BSA9 504 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 EBPLQ9BY08 206 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 SMG9Q9H0W8 520 aaKnown RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 ELOVL6Q9H5J4 265 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CLMPQ9H6B4 373 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 DGKBQ9Y6T7 804 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 THSD7BQ9C0I4 1608 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 HNRNPCP07910 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 ANXA5P08758 320 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CCNA2P20248 432 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 CRHBPP24387 322 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 RPS14P62263 151 aaKnown RBP19.1■□□□□ 0.65
COL13A1-201ENST00000354547 GTF2H3Q13889 308 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 LRRC66Q68CR7 880 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 DCAF4L2Q8NA75 395 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 APOLD1Q96LR9 279 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 ATG10Q9H0Y0 220 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 GPRC5BQ9NZH0 403 aa19.1■□□□□ 0.65
COL13A1-201ENST00000354547 MYO1GB0I1T2 1018 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 XYLBO75191 536 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ZBTB11O95625 1053 aaPredicted RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 CCR7P32248 378 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 TTKP33981 857 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 PSMD7P51665 324 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 USP39Q53GS9 565 aaKnown RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 CES5AQ6NT32 575 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 PRR23BQ6ZRT6 265 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 UBE2R2Q712K3 238 aaPredicted RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 TBC1D15Q8TC07 691 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 MYLIPQ8WY64 445 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 OSBPL10Q9BXB5 764 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 GRXCR2A6NFK2 248 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 WDR47O94967 919 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 PRSS23O95084 383 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 KRT6AP02538 564 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 KRT6BP04259 564 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 EBLN1P0CF75 366 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 MSH3P20585 1137 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 RPS3P23396 243 aaKnown RBP eCLIP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 KRT6CP48668 564 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 CD47Q08722 323 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 LMAN2Q12907 356 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 NFATC3Q12968 1075 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 SF1Q15637 639 aaKnown RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 XAF1Q6GPH4 301 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 BBS7Q8IWZ6 715 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 OR13F1Q8NGS4 319 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ZNF420Q8TAQ5 688 aaPredicted RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 PNPT1Q8TCS8 783 aaKnown RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 GIPC3Q8TF64 312 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 TANKQ92844 425 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ATP13A3Q9H7F0 1226 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 KAT8Q9H7Z6 458 aaKnown RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 PDE10AQ9Y233 779 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 HOXA2O43364 376 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 SLC14A1Q13336 389 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 DDX39BQ13838 428 aaKnown RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ZXDCQ2QGD7 858 aaPredicted RBP19.09■□□□□ 0.65
COL13A1-201ENST00000354547 TTLL9Q3SXZ7 439 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 TTC23Q5W5X9 447 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ANKRD26P1Q6NSI1 321 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 DHRS4L2Q6PKH6 230 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 CRTC1Q6UUV9 634 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 CNIH3Q8TBE1 160 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 BBS2Q9BXC9 721 aa19.09■□□□□ 0.65
COL13A1-201ENST00000354547 ZNF701M0R085 212 aaPredicted RBP19.08■□□□□ 0.65
COL13A1-201ENST00000354547 XPNPEP2O43895 674 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 EPORP19235 508 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 SIM2Q14190 667 aaPredicted RBP19.08■□□□□ 0.65
COL13A1-201ENST00000354547 C6orf141Q5SZD1 244 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 OR4F3Q6IEY1 312 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 C16orf87Q6PH81 154 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 DOK6Q6PKX4 331 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 TRIM46Q7Z4K8 759 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 VRK3Q8IV63 474 aa19.08■□□□□ 0.65
COL13A1-201ENST00000354547 SPARTQ8N0X7 666 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms