RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 LIMK1P53667 647 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ASAH1Q13510 395 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 GOLGA7BQ2TAP0 167 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CYP27C1Q4G0S4 372 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 SLC35F1Q5T1Q4 408 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CEP68Q76N32 757 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 RASAL3Q86YV0 1011 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CHPFQ8IZ52 775 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CPXCR1Q8N123 301 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 OR52H1Q8NGJ2 320 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 BCL7CQ8WUZ0 217 aaPredicted RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 APH1BQ8WW43 257 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 L3HYPDHQ96EM0 354 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 GORASP2Q9H8Y8 452 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 COX16Q9P0S2 106 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ZNF175Q9Y473 711 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 NUP205Q92621 2012 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 SCAMP3O14828 347 aaKnown RBP12.96□□□□□ -0.33
IFT88-202ENST00000351808 CPN2P22792 545 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 HERVK_113P63132 956 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 CDH17Q12864 832 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 PGM5Q15124 567 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 SURF1Q15526 300 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 ATP6AP1LQ52LC2 224 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 FBXO48Q5FWF7 155 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 GNASQ5JWF2 1037 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 RYBPQ8N488 228 aaPredicted RBP12.96□□□□□ -0.33
IFT88-202ENST00000351808 ZNF366Q8N895 744 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 PTGR2Q8N8N7 351 aaPredicted RBP12.96□□□□□ -0.33
IFT88-202ENST00000351808 ERVK-6Q9BXR3 956 aa12.96□□□□□ -0.33
IFT88-202ENST00000351808 TRIM45Q9H8W5 580 aaPredicted RBP12.96□□□□□ -0.33
IFT88-202ENST00000351808 NDRG4Q9ULP0 352 aaKnown RBP12.96□□□□□ -0.33
IFT88-202ENST00000351808 RGS20O76081 388 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 PROS1P07225 676 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 CD72P21854 359 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 TKTL1P51854 596 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 ELP6Q0PNE2 266 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 GRM1Q13255 1194 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 GTF2H3Q13889 308 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.34
IFT88-202ENST00000351808 CARD16Q5EG05 197 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 GPR158Q5T848 1215 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 KIAA0319Q5VV43 1072 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 KANK2Q63ZY3 851 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 PLET1Q6UQ28 207 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.34
IFT88-202ENST00000351808 TSPYL5Q86VY4 417 aaPredicted RBP12.96□□□□□ -0.34
IFT88-202ENST00000351808 P3H2Q8IVL5 708 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 TAGAPQ8N103 731 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.34
IFT88-202ENST00000351808 RNF139Q8WU17 664 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 KLHL15Q96M94 604 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 PORCNQ9H237 461 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 FANCFQ9NPI8 374 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 TLR6Q9Y2C9 796 aa12.96□□□□□ -0.34
IFT88-202ENST00000351808 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.34
IFT88-202ENST00000351808 A0A075B6Q4 140 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 WASHC1A8K0Z3 465 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SGTAO43765 313 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ZNF623O75123 536 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PTHP01270 115 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ITGB1P05556 798 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CLCN7P51798 805 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 DGKQP52824 942 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PTPN5P54829 565 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 MAB21L1Q13394 359 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CPZQ66K79 652 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CLHC1Q8NHS4 586 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SIPA1Q96FS4 1042 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 THUMPD3Q9BV44 507 aaKnown RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CLCA3PQ9Y6N3 262 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ZNF98A6NK75 572 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 MYO1GB0I1T2 1018 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PLA2G10O15496 165 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CSF3P09919 207 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ITGALP20701 1170 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 HOXA9P31269 272 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 TGM4P49221 684 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 MRPL28Q13084 256 aaKnown RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 PCID2Q5JVF3 399 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 TMEM207Q6UWW9 146 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 FAM131AQ6UXB0 335 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ISCA2Q86U28 154 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms