RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RASGRP3Q8IV61 690 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 LINC01555Q8NAE3 123 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 SIDT2Q8NBJ9 832 aaKnown RBP21.39■■□□□ 1.01
SNX3-202ENST00000349379 KIF18AQ8NI77 898 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 RAD51AP1Q96B01 352 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 OR6C1Q96RD1 312 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 GPR21Q99679 349 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 SPHK1Q9NYA1 384 aa21.39■■□□□ 1.01
SNX3-202ENST00000349379 TMEM184BQ9Y519 407 aaPredicted RBP21.39■■□□□ 1.01
SNX3-202ENST00000349379 DSPP15924 2871 aaKnown RBP21.39■■□□□ 1.01
SNX3-202ENST00000349379 HEATR5BQ9P2D3 2071 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 EIF3FO00303 357 aaPredicted RBP21.38■■□□□ 1.01
SNX3-202ENST00000349379 RASGRF2O14827 1237 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 PSIP1O75475 530 aaKnown RBP21.38■■□□□ 1.01
SNX3-202ENST00000349379 FOLR1P15328 257 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 CDH3P22223 829 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 CCNFP41002 786 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 BDKRB1P46663 353 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 PLTPP55058 493 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 FOXM1Q08050 763 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 MGAT5Q09328 741 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 TGIF1Q15583 401 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 COL28A1Q2UY09 1125 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 RBM20Q5T481 1227 aaKnown RBP21.38■■□□□ 1.01
SNX3-202ENST00000349379 C19orf48Q6RUI8 117 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 SPESP1Q6UW49 350 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 SPNS2Q8IVW8 549 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 INPP5DQ92835 1189 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 FOPNLQ96NB1 174 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 OR2A14Q96R47 310 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 SAYSD1Q9NPB0 183 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 PPANQ9NQ55 473 aaKnown RBP21.38■■□□□ 1.01
SNX3-202ENST00000349379 PILRAQ9UKJ1 303 aa21.38■■□□□ 1.01
SNX3-202ENST00000349379 CORO1CQ9ULV4 474 aaPredicted RBP21.38■■□□□ 1.01
SNX3-202ENST00000349379 SLC9B1P1A6NJY1 282 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 VPS26AO75436 327 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 DLGAP3O95886 979 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 MSL3P1P0C860 447 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 EBLN1P0CF75 366 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 MPC1LP0DKB6 136 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 ENO3P13929 434 aaPredicted RBP21.37■■□□□ 1.01
SNX3-202ENST00000349379 ST6GAL1P15907 406 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 UGT2B7P16662 529 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 SLC7A5Q01650 507 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 ACY1Q03154 408 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 KCNAB1Q14722 419 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 KIR2DS3Q14952 304 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 CCSMST1Q4G0I0 132 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 CYB5D1Q6P9G0 228 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 CYHR1Q6ZMK1 362 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 NOA1Q8NC60 698 aaKnown RBP21.37■■□□□ 1.01
SNX3-202ENST00000349379 MNS1Q8NEH6 495 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 OR2L8Q8NGY9 312 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 HMGCLL1Q8TB92 370 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 PYROXD1Q8WU10 500 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 SKA2Q8WVK7 121 aaPredicted RBP21.37■■□□□ 1.01
SNX3-202ENST00000349379 TRAPPC9Q96Q05 1148 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 NDNQ99608 321 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 RAB11FIP5Q9BXF6 653 aa21.37■■□□□ 1.01
SNX3-202ENST00000349379 CFAP47Q6ZTR5 3102 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 ARHGEF33A8MVX0 844 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 CBSLP0DN79 551 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 ERGP11308 486 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 CBSP35520 551 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 CUL1Q13616 776 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 SLC5A12Q1EHB4 618 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNX3-202ENST00000349379 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.36■■□□□ 1.01
SNX3-202ENST00000349379 TTC23LQ6PF05 361 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 BPHLQ86WA6 291 aaPredicted RBP21.36■■□□□ 1.01
SNX3-202ENST00000349379 MAGEC3Q8TD91 643 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 DENND1AQ8TEH3 1009 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 NKD1Q969G9 470 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 CRELD1Q96HD1 420 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 IL17FQ96PD4 163 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 PRORYQ9H606 182 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 ZDHHC18Q9NUE0 388 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 ZFATQ9P243 1243 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 CIDEBQ9UHD4 219 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 PSAT1Q9Y617 370 aa21.36■■□□□ 1.01
SNX3-202ENST00000349379 ESYT3A0FGR9 886 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 PRICKLE3O43900 615 aaPredicted RBP21.35■■□□□ 1.01
SNX3-202ENST00000349379 STK17BO94768 372 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 PVRP15151 417 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 SSTR1P30872 391 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 ARL4DP49703 201 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 UCNP55089 124 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 CDKN2DP55273 166 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 TUBB3Q13509 450 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 MAP7Q14244 749 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 BROXQ5VW32 411 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 UGT3A1Q6NUS8 523 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 CYS1Q717R9 158 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 TIPARPQ7Z3E1 657 aaKnown RBP21.35■■□□□ 1.01
SNX3-202ENST00000349379 SLC26A11Q86WA9 606 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 CPNE9Q8IYJ1 553 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 FBXO15Q8NCQ5 510 aaPredicted RBP21.35■■□□□ 1.01
SNX3-202ENST00000349379 ZNF501Q96CX3 271 aaPredicted RBP21.35■■□□□ 1.01
SNX3-202ENST00000349379 FCRL4Q96PJ5 515 aa21.35■■□□□ 1.01
SNX3-202ENST00000349379 MCMBPQ9BTE3 642 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms