RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 IL17FQ96PD4 163 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GPR87Q9BY21 358 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 ACTR5Q9H9F9 607 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 SYTL2Q9HCH5 934 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 ZNF71Q9NQZ8 489 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 PCMTD2Q9NV79 361 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GNPTGQ9UJJ9 305 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 UBR5O95071 2799 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 PCM1Q15154 2024 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 MEN1O00255 615 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 NDUFS3O75489 264 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 SLCO2B1O94956 709 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 CTSBP07858 339 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 RAB28P51157 221 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 ITGA1P56199 1179 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 CYP1B1Q16678 543 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 KYNUQ16719 465 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 TYSND1Q2T9J0 566 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 PTCHD3Q3KNS1 767 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 FAM69BQ5VUD6 431 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 KIAA0930Q6ICG6 404 aaPredicted RBP12.83□□□□□ -0.36
CLCC1-202ENST00000348264 UNC5DQ6UXZ4 953 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 TAX1BP1Q86VP1 789 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 CAND1Q86VP6 1230 aaKnown RBP12.83□□□□□ -0.36
CLCC1-202ENST00000348264 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 FAM20CQ8IXL6 584 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 SYTL1Q8IYJ3 562 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 SLC35F6Q8N357 371 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 COG1Q8WTW3 980 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 CLIP3Q96DZ5 547 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 PBKQ96KB5 322 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 BIRC8Q96P09 236 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 KCNF1Q9H3M0 494 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 IL1RAPL1Q9NZN1 696 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
CLCC1-202ENST00000348264 MAN2B2Q9Y2E5 1009 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 NEU2Q9Y3R4 380 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 HEATR5BQ9P2D3 2071 aa12.83□□□□□ -0.36
CLCC1-202ENST00000348264 FLNCQ14315 2725 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 PCSK5Q92824 1860 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 RELNP78509 3460 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 KRT87PA6NCN2 255 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 ISM1B1AKI9 464 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 E7EQ34 232 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 H3BMH7 237 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 K7EM74 188 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 PGRMC1O00264 195 aaKnown RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 MAP3K7O43318 606 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 ZNF749O43361 778 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 NIPSNAP2O75323 286 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 DNAJB5O75953 348 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 RECKO95980 971 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 KLK3P07288 261 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 CAPN1P07384 714 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 F7P08709 466 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 NR1D1P20393 614 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 COILP38432 576 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 BDKRB1P46663 353 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 PMS2P54278 862 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 RPS15P62841 145 aaKnown RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 KIR2DS3Q14952 304 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 UGT8Q16880 541 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 SLC5A12Q1EHB4 618 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 LACTB2Q53H82 288 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 IZUMO3Q5VZ72 239 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 ZNF385CQ66K41 422 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 CPZQ66K79 652 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 MRNIPQ6NTE8 343 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 CCDC137Q6PK04 289 aaKnown RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 SYVN1Q86TM6 617 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 LRRC6Q86X45 466 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 C2orf73Q8N5S3 287 aaPredicted RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 TCTN2Q96GX1 697 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 TRIM55Q9BYV6 548 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 CHRNA10Q9GZZ6 450 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 SERTAD3Q9UJW9 196 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
CLCC1-202ENST00000348264 TP53TG5Q9Y2B4 290 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 KLHL20Q9Y2M5 609 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 NFS1Q9Y697 457 aa12.82□□□□□ -0.36
CLCC1-202ENST00000348264 GOLGA8MH3BSY2 632 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 KDM1AO60341 852 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 RFPL1O75677 317 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 RPN2P04844 631 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 RAB40ALP0C0E4 278 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 MAGP20916 626 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 CD9P21926 228 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 FMO4P31512 558 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 CCSMST1Q4G0I0 132 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 OTOAQ7RTW8 1153 aa12.81□□□□□ -0.36
CLCC1-202ENST00000348264 AGGF1Q8N302 714 aaeCLIP12.81□□□□□ -0.36
CLCC1-202ENST00000348264 OR2L8Q8NGY9 312 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms