RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KAT8Q9H7Z6 458 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 FANCEQ9HB96 536 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 GALNT8Q9NY28 637 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 LMCD1Q9NZU5 365 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 BCAP29Q9UHQ4 241 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ADGRE2Q9UHX3 823 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 LRFN2Q9ULH4 789 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 SLC6A14Q9UN76 642 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 SH2B3Q9UQQ2 575 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 OARD1Q9Y530 152 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 J3QRK9 145 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 MANBAO00462 879 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TEX28O15482 410 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 XPNPEP2O43895 674 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SEC22BO75396 215 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GPIP06744 558 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 C1SP09871 688 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 C7P10643 843 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SRCP12931 536 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CD9P21926 228 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ITPKAP23677 461 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PPP2R2BQ00005 443 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 MVKQ03426 396 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 FOXM1Q08050 763 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ARHGEF7Q14155 803 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CBX2Q14781 532 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 MYBPC3Q14896 1274 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ZBED5Q49AG3 693 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 RUNDC3AQ59EK9 446 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GTF2IRD2BQ6EKJ0 949 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 VTCN1Q7Z7D3 282 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GALNT5Q7Z7M9 940 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PATL1Q86TB9 770 aaKnown RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GTF2IRD2Q86UP8 949 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ERI1Q8IV48 349 aaKnown RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF784Q8NCA9 323 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 BPIFB6Q8NFQ5 453 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 OR7A2PQ8NGA2 310 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PNPT1Q8TCS8 783 aaKnown RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SLC13A3Q8WWT9 602 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SEPT8Q92599 483 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 USP7Q93009 1102 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 FKBP10Q96AY3 582 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 FBXL8Q96CD0 374 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TCEAL4Q96EI5 215 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 LINC00597Q9H2U6 94 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 VCX3AQ9NNX9 186 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 FAM118AQ9NWS6 357 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 RHBDL2Q9NX52 303 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TRPM5Q9NZQ8 1165 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GULP1Q9UBP9 304 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PCYT1BQ9Y5K3 369 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PCM1Q15154 2024 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 A0A1W2PRU2 124 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TRIM64BA6NI03 449 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 AGAP14A8MT82 685 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 INMTO95050 263 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ZBTB11O95625 1053 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CTSAP10619 480 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF16P17020 682 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ALDH7A1P49419 539 aaKnown RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 WNT3P56703 355 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CYP4F3Q08477 520 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 INPP5AQ14642 412 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SPCS2Q15005 226 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CRY1Q16526 586 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 KCTD21Q4G0X4 260 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 INO80DQ53TQ3 878 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TMTC4Q5T4D3 741 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SLC16A12Q6ZSM3 486 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 FRA10AC1Q70Z53 315 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TRIM46Q7Z4K8 759 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 TMEM25Q86YD3 366 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SFTPA1Q8IWL2 248 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CLECL1Q8IZS7 167 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 DHRSXQ8N5I4 330 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ZBTB2Q8N680 514 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 HM13Q8TCT9 377 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 DDI1Q8WTU0 396 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 DOK1Q99704 481 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 EGFL8Q99944 293 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 C9orf16Q9BUW7 83 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 THUMPD3Q9BV44 507 aaKnown RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SLC46A2Q9BY10 475 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 NUDT4Q9NZJ9 180 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 LIMD1Q9UGP4 676 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SLC22A14Q9Y267 594 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 PKP3Q9Y446 797 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GLYATL1P3A0A0U1RQE8 302 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 SCN2BO60939 215 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 GCM2O75603 506 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-201ENST00000347613 KLHL18O94889 574 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 OLFM2O95897 454 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 LDLRP01130 860 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 ADRA2AP08913 450 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 LINC00271P0C7V0 271 aa5.89□□□□□ -1.47
CLCN3-201ENST00000347613 CDH1P12830 882 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms