RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TUBB6Q9BUF5 446 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 TPSD1Q9BZJ3 242 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 ZNF385DQ9H6B1 395 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 GPR27Q9NS67 375 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 ARL8BQ9NVJ2 186 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 DLGAP2Q9P1A6 1054 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 MUTYHQ9UIF7 546 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 PNMA8BQ9ULN7 279 aaPredicted RBP10.68□□□□□ -0.7
ECM1-201ENST00000346569 SLC22A14Q9Y267 594 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 FIS1Q9Y3D6 152 aa10.68□□□□□ -0.7
ECM1-201ENST00000346569 METTL12A8MUP2 240 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 K7ESF4 209 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 STK25O00506 426 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 KATNA1O75449 491 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 SKAP2O75563 359 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 ATP5HO75947 161 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 SLC16A8O95907 504 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 DCNP07585 359 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 HTR1BP28222 390 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 RABIFP47224 123 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 SCTRP47872 440 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 CXCL12P48061 93 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PXNP49023 591 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 RNF165Q6ZSG1 346 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 Q6ZSR6 202 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 Q6ZSR9 355 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 GALNT13Q8IUC8 556 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 CADM4Q8NFZ8 388 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 OR13H1Q8NG92 308 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 FAM174AQ8TBP5 190 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 METTL6Q8TCB7 284 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 MAGEC3Q8TD91 643 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ZNF480Q8WV37 535 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 TWIST2Q8WVJ9 160 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ATP6V1E2Q96A05 226 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 RAD51AP1Q96B01 352 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 NSL1Q96IY1 281 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PPP1R36Q96LQ0 422 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 CDK15Q96Q40 435 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 INSM2Q96T92 566 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 CCT7Q99832 543 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ATG10Q9H0Y0 220 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PCED1AQ9H1Q7 454 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 AKTIPQ9H8T0 292 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 C11orf16Q9NQ32 467 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 DNAJC11Q9NVH1 559 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ARMCX1Q9P291 453 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PSMD13Q9UNM6 376 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 WDR37Q9Y2I8 494 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 RNF11Q9Y3C5 154 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 GPSM3Q9Y4H4 160 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ANGPTL3Q9Y5C1 460 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PABPN1LA6NDY0 278 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 PRR5-ARHGAP8B1AHC4 643 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ANKRD65E5RJM6 399 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 E7ENX8 843 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 E9PBE3 544 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 IFRD1O00458 451 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 GIPC1O14908 333 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PIP5K1BO14986 540 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 KLHL41O60662 606 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 WFS1O76024 890 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 WDR47O94967 919 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 UNC5CO95185 931 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ENO1P06733 434 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 CAPN1P07384 714 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PRR35P0CG20 571 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ERGP11308 486 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ACP5P13686 325 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 AOC1P19801 751 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 NCF2P19878 526 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 IDSP22304 550 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 RPL10P27635 214 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 ADSLP30566 484 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 CASP2P42575 452 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 GNPDA1P46926 289 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 NCALDP61601 193 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 TAP2Q03519 686 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 E2F2Q14209 437 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 CLCA4Q14CN2 919 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 XKR7Q5GH72 579 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 TMEM198Q66K66 360 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 ABRAXAS1Q6UWZ7 409 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 WASH2PQ6VEQ5 465 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 EFL1Q7Z2Z2 1120 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 THOC6Q86W42 341 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 TBC1D21Q8IYX1 336 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 CDYL2Q8N8U2 506 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 DCBLD1Q8N8Z6 715 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 OR5AR1Q8NGP9 310 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 OR5K2Q8NHB8 316 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 SETD7Q8WTS6 366 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 TSACCQ96A04 125 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 SLC7A6OSQ96CW6 309 aaPredicted RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 C19orf60Q96EN9 201 aa10.67□□□□□ -0.7
ECM1-201ENST00000346569 PTCD3Q96EY7 689 aaKnown RBP10.67□□□□□ -0.7
ECM1-201ENST00000346569 OR2M4Q96R27 311 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms