RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 SPAG16Q8N0X2 631 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 Q8N9G6 341 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 C14orf119Q9NWQ9 140 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 PTGFRNQ9P2B2 879 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GLYATL1P3A0A0U1RQE8 302 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 RAP2AP10114 183 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 FOSL2P15408 326 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ITGA2P17301 1181 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 PAICSP22234 425 aaKnown RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ERP29P30040 261 aaKnown RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GNPDA1P46926 289 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 CDKL1Q00532 357 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 MVKQ03426 396 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 PTCHD4Q6ZW05 846 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SLC37A3Q8NCC5 494 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 NCSTNQ92542 709 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 CCDC120Q96HB5 630 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TSSK3Q96PN8 268 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SMOQ99835 787 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TRIT1Q9H3H1 467 aaKnown RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SGTAO43765 313 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 B3GALNT1O75752 331 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 F7P08709 466 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TCF3P15923 654 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 MYL9P24844 172 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 STX4Q12846 297 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 E2F2Q14209 437 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GRB14Q14449 540 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 EPGNQ6UW88 154 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 UBE2R2Q712K3 238 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 CHMP1BQ7LBR1 199 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 RD3Q7Z3Z2 195 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GPR65Q8IYL9 337 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GPR156Q8NFN8 814 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 BBS4Q96RK4 519 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SLC6A15Q9H2J7 730 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 OXSMQ9NWU1 459 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 COMMD9Q9P000 198 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TESMINQ9Y4I5 508 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 A0A0U1RQF3 1178 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 A6NL46 340 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ARPC2O15144 300 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 GPR1P46091 355 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SNRPD2P62316 118 aaKnown RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 EIF2B5Q13144 721 aaKnown RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 FAM91A1Q658Y4 838 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 RAET1GQ6H3X3 334 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ZZZ3Q8IYH5 903 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 UBE2E3Q969T4 207 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TMBIM1Q969X1 311 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 KIFC1Q9BW19 673 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ABCG8Q9H221 673 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SLA2Q9H6Q3 261 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 TIGARQ9NQ88 270 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 ARMC1Q9NVT9 282 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 HECAQ9UBI9 543 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-201ENST00000346162 PHF11Q9UIL8 331 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 B3GNT3Q9Y2A9 372 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 MYH3P11055 1940 aa15.2■□□□□ 0.02
SRPK1-201ENST00000346162 COL2A1P02458 1487 aaPredicted RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 TTC34A8MYJ7 566 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 C9IYK1 514 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 TP73O15350 636 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 MTRF1O75570 445 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 GJA9P57773 515 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PIGFQ07326 219 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 OLIG2Q13516 323 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 CTU1Q7Z7A3 348 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 KIF18BQ86Y91 864 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PM20D2Q8IYS1 436 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 SH3YL1Q96HL8 342 aaPredicted RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PAK1IP1Q9NWT1 392 aaPredicted RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 ACTR3BQ9P1U1 418 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 DNAJB9Q9UBS3 223 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 CYTH4Q9UIA0 394 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 FKBPLQ9UIM3 349 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 CNOT11Q9UKZ1 510 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 STK16O75716 305 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PRAMEF1O95521 474 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 POLR2JP52435 117 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PTPN5P54829 565 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 CACNG1Q06432 222 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 SLC10A7Q0GE19 358 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 NDUFAF6Q330K2 333 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 DEF8Q6ZN54 512 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 RAVER1Q8IY67 606 aaKnown RBP15.19■□□□□ 0.02
SRPK1-201ENST00000346162 PPP1R16AQ96I34 528 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 AIFM2Q9BRQ8 373 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 ADAMTS10Q9H324 1103 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 IPPKQ9H8X2 491 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
SRPK1-201ENST00000346162 MYH7P12883 1935 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms