RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 DYRK1BQ9Y463 629 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ZNF646O15015 1829 aaPredicted RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 ANKDD1BA6NHY2 528 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TULP3O75386 442 aa13□□□□□ -0.33
CASC4-202ENST00000345795 PDYNP01213 254 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ANXA4P09525 319 aaPredicted RBP13□□□□□ -0.33
CASC4-202ENST00000345795 RPS26P62854 115 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 GPM6BQ13491 265 aa13□□□□□ -0.33
CASC4-202ENST00000345795 FAM26DQ5JW98 314 aa13□□□□□ -0.33
CASC4-202ENST00000345795 PRAMEF14Q5SWL7 426 aa13□□□□□ -0.33
CASC4-202ENST00000345795 CLECL1Q8IZS7 167 aa13□□□□□ -0.33
CASC4-202ENST00000345795 CXorf40AQ8TE69 158 aa13□□□□□ -0.33
CASC4-202ENST00000345795 DLG3Q92796 817 aa13□□□□□ -0.33
CASC4-202ENST00000345795 CMTM6Q9NX76 183 aa13□□□□□ -0.33
CASC4-202ENST00000345795 PDP2Q9P2J9 529 aa13□□□□□ -0.33
CASC4-202ENST00000345795 DHRS7Q9Y394 339 aa13□□□□□ -0.33
CASC4-202ENST00000345795 FADS3Q9Y5Q0 445 aa13□□□□□ -0.33
CASC4-202ENST00000345795 SOCS2O14508 198 aa13□□□□□ -0.33
CASC4-202ENST00000345795 SNAP29O95721 258 aa13□□□□□ -0.33
CASC4-202ENST00000345795 F11P03951 625 aa13□□□□□ -0.33
CASC4-202ENST00000345795 OR1E2P47887 323 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ERVK-8P63133 956 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ANKRD34AQ69YU3 496 aa13□□□□□ -0.33
CASC4-202ENST00000345795 CERS6Q6ZMG9 384 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TMEM151AQ8N4L1 468 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TCF12Q99081 682 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
CASC4-202ENST00000345795 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
CASC4-202ENST00000345795 PLXNA1Q9UIW2 1896 aa13□□□□□ -0.33
CASC4-202ENST00000345795 TTC36A6NLP5 189 aa13□□□□□ -0.33
CASC4-202ENST00000345795 C16orf96A6NNT2 1141 aa13□□□□□ -0.33
CASC4-202ENST00000345795 H3BSA7 217 aa13□□□□□ -0.33
CASC4-202ENST00000345795 K7ESM1 405 aa13□□□□□ -0.33
CASC4-202ENST00000345795 SLC16A8O95907 504 aa13□□□□□ -0.33
CASC4-202ENST00000345795 SERPINA1P01009 418 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ATP1B2P14415 290 aaPredicted RBP13□□□□□ -0.33
CASC4-202ENST00000345795 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 SGCGQ13326 291 aa13□□□□□ -0.33
CASC4-202ENST00000345795 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 NFE2L1Q14494 772 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ASTLQ6HA08 431 aaPredicted RBP13□□□□□ -0.33
CASC4-202ENST00000345795 EFL1Q7Z2Z2 1120 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 FAM129CQ86XR2 697 aa13□□□□□ -0.33
CASC4-202ENST00000345795 C2orf15Q8WU43 125 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 EXOSC8Q96B26 276 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 P2RY13Q9BPV8 354 aa13□□□□□ -0.33
CASC4-202ENST00000345795 YIPF2Q9BWQ6 316 aa13□□□□□ -0.33
CASC4-202ENST00000345795 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
CASC4-202ENST00000345795 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
CASC4-202ENST00000345795 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
CASC4-202ENST00000345795 RAB23Q9ULC3 237 aa13□□□□□ -0.33
CASC4-202ENST00000345795 RECQL5O94762 991 aaPredicted RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 MAGP20916 626 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 HSPB3Q12988 150 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ZFP1Q6P2D0 407 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 TNFAIP8L2Q6P589 184 aaPredicted RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 CHSY3Q70JA7 882 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PDSS2Q86YH6 399 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 PIH1D2Q8WWB5 315 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 TMIGD2Q96BF3 282 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ASB9Q96DX5 294 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 INPP5KQ9BT40 448 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 DNAJC11Q9NVH1 559 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 SNX6Q9UNH7 406 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 DLGAP4Q9Y2H0 992 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PCDHB1Q9Y5F3 818 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PGRP06401 933 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 IL7RP16871 459 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ACRV1P26436 265 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 GDI1P31150 447 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 HOXC13P31276 330 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 FGD3Q5JSP0 725 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 AP1ARQ63HQ0 302 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 APIPQ96GX9 242 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 VAPAQ9P0L0 249 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 C6orf203Q9P0P8 240 aaPredicted RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 SNX5Q9Y5X3 404 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 KCNE2Q9Y6J6 123 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ZNF638Q14966 1978 aaKnown RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 IGLV3-10A0A075B6K4 115 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 PLOD2O00469 737 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ADH5P11766 374 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 KIR3DL1P43629 444 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 RPS14P62263 151 aaKnown RBP12.99□□□□□ -0.33
CASC4-202ENST00000345795 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 AAGABQ6PD74 315 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 TXNDC11Q6PKC3 985 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 ENPP6Q6UWR7 440 aa12.99□□□□□ -0.33
CASC4-202ENST00000345795 LARP4Q71RC2 724 aaKnown RBP eCLIP12.99□□□□□ -0.335e-6■■■■■ 32.5
CASC4-202ENST00000345795 CNTN4Q8IWV2 1026 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms