RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SCML2Q9UQR0 700 aa10.69□□□□□ -0.7
RPL28-201ENST00000344063 STX16O14662 325 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 FFAR2O15552 330 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PQBP1O60828 265 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 C9P02748 559 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 RFX3P48380 749 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ALDH3A2P51648 485 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 TMBIM6P55061 237 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 UBE2UQ5VVX9 321 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 FUT10Q6P4F1 479 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 DLK2Q6UY11 383 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 HACD2Q6Y1H2 254 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GTPBP3Q969Y2 492 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 B3GALT6Q96L58 329 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 BBS4Q96RK4 519 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 CORO1BQ9BR76 489 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 MEAF6Q9HAF1 191 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 TMLHEQ9NVH6 421 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 ZNF510Q9Y2H8 683 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 A0A1W2PQ67 120 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 EFCAB14O75071 495 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 BEST1O76090 585 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 INMTO95050 263 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 CYP11A1P05108 521 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 VARSP26640 1264 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 HNF4AP41235 474 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GSTM5P46439 218 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 NCS1P62166 190 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ABRQ12979 859 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GRB7Q14451 532 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SLC15A3Q8IY34 581 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GOLM1Q8NBJ4 401 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 HDAC2Q92769 488 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 TRNT1Q96Q11 434 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 IL12RB2Q99665 862 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 CAPN10Q9HC96 672 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PCDHB3Q9Y5E6 796 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SPACA6W5XKT8 324 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 A0A0U1RQF3 1178 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 IQCF5A8MTL0 148 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SNAI1O95863 264 aaPredicted RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 PFKMP08237 780 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ITPKAP23677 461 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SLC15A1P46059 708 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SCN1BQ07699 218 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SERINC3Q13530 473 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 IL18Q14116 193 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ZNF404Q494X3 552 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■■■■ 30
RPL28-201ENST00000344063 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 NPLQ9BXD5 320 aaPredicted RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 ADAMTS10Q9H324 1103 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ING4Q9UNL4 249 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 NUMBLQ9Y6R0 609 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PLK4O00444 970 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ENPP3O14638 875 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 OR10H3O60404 316 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 RPLP0P05388 317 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 C7P10643 843 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ARSAP15289 507 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 GLDCP23378 1020 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 FLT3LGP49771 235 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 HLCSP50747 726 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 HMGCS1Q01581 520 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 SOX4Q06945 474 aaPredicted RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 ANKRD13BQ86YJ7 626 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 RAVER1Q8IY67 606 aaKnown RBP10.68□□□□□ -0.7
RPL28-201ENST00000344063 C11orf65Q8NCR3 313 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 PPCDCQ96CD2 204 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 C8orf48Q96LL4 319 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 OSGEPL1Q9H4B0 414 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 POLE3Q9NRF9 147 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 EMCNQ9ULC0 261 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 ERVK-11Q9UQG0 969 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 LYVE1Q9Y5Y7 322 aa10.68□□□□□ -0.7
RPL28-201ENST00000344063 NHSL1Q5SYE7 1610 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 GON4LQ3T8J9 2241 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 LRRC14BA6NHZ5 514 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 ZSCAN5BA6NJL1 495 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 CDC7O00311 574 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 CASKO14936 926 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 AREL1O15033 823 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 GUCY1B2O75343 617 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 PRKCGP05129 697 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 IQCF3P0C7M6 154 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 PRKAR1AP10644 381 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 MAPK9P45984 424 aa10.67□□□□□ -0.7
RPL28-201ENST00000344063 SRSF11Q05519 484 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms