RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 BTN3A3O00478 584 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 TFECO14948 347 aaPredicted RBP16.62■□□□□ 0.25
CDK11B-201ENST00000340677 KIAA0355O15063 1070 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 CPNE6O95741 557 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 PLATP00750 562 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 ERVK-10P10266 1014 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 PTGIRP43119 386 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 CLCN3P51790 818 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 MBTD1Q05BQ5 628 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 TNK2Q07912 1038 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 ART3Q13508 389 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 SLC12A1Q13621 1099 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 ZIK1Q3SY52 487 aaPredicted RBP16.62■□□□□ 0.25
CDK11B-201ENST00000340677 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 EFL1Q7Z2Z2 1120 aaKnown RBP16.62■□□□□ 0.25
CDK11B-201ENST00000340677 FBXW8Q8N3Y1 598 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 METTL21AQ8WXB1 218 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 RBPMSQ93062 196 aaKnown RBP16.62■□□□□ 0.25
CDK11B-201ENST00000340677 PTERQ96BW5 349 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 MSTO1Q9BUK6 570 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 SPNS1Q9H2V7 528 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 BAIAP2Q9UQB8 552 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 TNFSF13BQ9Y275 285 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
CDK11B-201ENST00000340677 FAM237BA0A1B0GVD1 139 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 MARCH11A6NNE9 402 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 SSX4O60224 188 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 TTC4O95801 387 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 GALCP54803 685 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.251e-7■■□□□ 11.7
CDK11B-201ENST00000340677 GPR33Q49SQ1 333 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 PDZK1Q5T2W1 519 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 USP53Q70EK8 1073 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 HIPK1Q86Z02 1210 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ZNF276Q8N554 614 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 TMEM102Q8N9M5 508 aaPredicted RBP16.61■□□□□ 0.25
CDK11B-201ENST00000340677 SNX33Q8WV41 574 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ROBO4Q8WZ75 1007 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 HAPLN2Q9GZV7 340 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 OR6C70A6NIJ9 312 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 SLC30A4O14863 429 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 OGTO15294 1046 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 CXCL14O95715 111 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 IFNA4P05014 189 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 EDN1P05305 212 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 TRAPPC2P0DI81 140 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 TRAPPC2BP0DI82 140 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ADORA3P0DMS8 318 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ALDH9A1P49189 494 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 FGL2Q14314 439 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ETFDHQ16134 617 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 GPAT3Q53EU6 434 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 DEGS2Q6QHC5 323 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
CDK11B-201ENST00000340677 FAM83FQ8NEG4 500 aaPredicted RBP16.61■□□□□ 0.25
CDK11B-201ENST00000340677 OR5T2Q8NGG2 359 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 OR10J5Q8NHC4 309 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 PFDN5Q99471 154 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 LGMNQ99538 433 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 MED18Q9BUE0 208 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 SLC22A4Q9H015 551 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ZNF768Q9H5H4 540 aaKnown RBP16.61■□□□□ 0.25
CDK11B-201ENST00000340677 ELOVL6Q9H5J4 265 aa16.61■□□□□ 0.25
CDK11B-201ENST00000340677 PAK6Q9NQU5 681 aaPredicted RBP16.61■□□□□ 0.25
CDK11B-201ENST00000340677 SMIM35A0A1B0GVV1 85 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.6■□□□□ 0.25
CDK11B-201ENST00000340677 PHGDHO43175 533 aaKnown RBP16.6■□□□□ 0.25
CDK11B-201ENST00000340677 FAM189A1O60320 539 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 PIAS2O75928 621 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 PEX11BO96011 259 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
CDK11B-201ENST00000340677 GCLMP48507 274 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 IKZF1Q13422 519 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 TBCCQ15814 346 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 TFAP2DQ7Z6R9 452 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 LNX1Q8TBB1 728 aaPredicted RBP16.6■□□□□ 0.25
CDK11B-201ENST00000340677 PROX1Q92786 737 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 EDEM2Q9BV94 578 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 TAS2R9Q9NYW1 312 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 COPG2Q9UBF2 871 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 FBXO5Q9UKT4 447 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 NAALAD2Q9Y3Q0 740 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 RALGAPA2Q2PPJ7 1873 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 SCAMP2O15127 329 aaKnown RBP16.6■□□□□ 0.25
CDK11B-201ENST00000340677 SIGLEC6O43699 453 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 HOXC8P31273 242 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 PSEN2P49810 448 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 SP3Q02447 781 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 GLO1Q04760 184 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 MFSD10Q14728 455 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 HSD17B12Q53GQ0 312 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 NLGN4XQ8N0W4 816 aa16.6■□□□□ 0.25
CDK11B-201ENST00000340677 FBXL13Q8NEE6 735 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms