RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 PRPF18Q99633 342 aaKnown RBP11.47□□□□□ -0.57
C2orf88-201ENST00000340623 APOOQ9BUR5 198 aa11.47□□□□□ -0.57
C2orf88-201ENST00000340623 XKR8Q9H6D3 395 aa11.47□□□□□ -0.57
C2orf88-201ENST00000340623 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
C2orf88-201ENST00000340623 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
C2orf88-201ENST00000340623 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
C2orf88-201ENST00000340623 TTC28Q96AY4 2481 aa11.47□□□□□ -0.57
C2orf88-201ENST00000340623 K7ESM1 405 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 ZW10O43264 779 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 CD6P30203 668 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MRPS22P82650 360 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MAP7Q14244 749 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 FASTKQ14296 549 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 OR4D1Q15615 310 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 SPDYE7PQ495Y7 208 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 ZNF549Q6P9A3 640 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 AGTRAPQ6RW13 159 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 Q6ZSR6 202 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 TWIST2Q8WVJ9 160 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 JPH3Q8WXH2 748 aaPredicted RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 GFM2Q969S9 779 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 C7orf26Q96N11 449 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 HDAC8Q9BY41 377 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 CADM1Q9BY67 442 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 GSDMCQ9BYG8 508 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 POPDC3Q9HBV1 291 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 SLC2A4RGQ9NR83 387 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 NDOR1Q9UHB4 597 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 ZNF490Q9ULM2 529 aaPredicted RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 CLDN9O95484 217 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 JUNDP17535 347 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 CXCR2P25025 360 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MAPK1P28482 360 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 SOAT1P35610 550 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 CCR3P51677 355 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 AP1S2P56377 157 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 TYSND1Q2T9J0 566 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 IYDQ6PHW0 289 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 RASGEF1AQ8N9B8 481 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 IL17FQ96PD4 163 aa11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MCCC1Q96RQ3 725 aaPredicted RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 MRPL40Q9NQ50 206 aaKnown RBP11.46□□□□□ -0.57
C2orf88-201ENST00000340623 A6NHS1 94 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 SDC3O75056 442 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 ALDH4A1P30038 563 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 MED21Q13503 144 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 SMAD2Q15796 467 aaKnown RBP11.46□□□□□ -0.58
C2orf88-201ENST00000340623 RIPOR1Q6ZS17 1223 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 ARL10Q8N8L6 244 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 FAM156AQ8NDB6 213 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 PREBQ9HCU5 417 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 AHSPQ9NZD4 102 aa11.46□□□□□ -0.58
C2orf88-201ENST00000340623 RHPN2P1A8MT19 583 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ZSCAN9O15535 394 aaPredicted RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 PI15O43692 258 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ALOX15P16050 662 aaPredicted RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 GNAZP19086 355 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 CCR7P32248 378 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ADPRHP54922 357 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 STX5Q13190 355 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 FRG1Q14331 258 aaKnown RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 AMZ1Q400G9 498 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 MACC1Q6ZN28 852 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 LPCAT2Q7L5N7 544 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 HPS6Q86YV9 775 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 PLA2G15Q8NCC3 412 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 UBE2E3Q969T4 207 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 CCDC138Q96M89 665 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 NSUN5Q96P11 429 aaKnown RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 EFHD1Q9BUP0 239 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 RHBGQ9H310 441 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 MIEF1Q9NQG6 463 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 SAR1AQ9NR31 198 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 APOBEC3BQ9UH17 382 aaKnown RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 PEX1O43933 1283 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 THRAP10827 490 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 ARRB1P49407 418 aaPredicted RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 SLC18A1P54219 525 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 CSTF1Q05048 431 aaKnown RBP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 IHHQ14623 411 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.45□□□□□ -0.58
C2orf88-201ENST00000340623 CTSL3PQ5NE16 218 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 IRGCQ6NXR0 463 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 SYT12Q8IV01 421 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 AADATQ8N5Z0 425 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 VPS37AQ8NEZ2 397 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 LKAAEAR1Q8TD35 194 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 PTERQ96BW5 349 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 C19orf60Q96EN9 201 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 MSLNLQ96KJ4 702 aa11.45□□□□□ -0.58
C2orf88-201ENST00000340623 APOLD1Q96LR9 279 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms