RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ATG10Q9H0Y0 220 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ITM2CQ9NQX7 267 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 INIPQ9NRY2 104 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 VNN3Q9NY84 501 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 GPRC5BQ9NZH0 403 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ERGIC3Q9Y282 383 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 SLC45A1Q9Y2W3 748 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 TNPO3Q9Y5L0 923 aaKnown RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 GMPPBQ9Y5P6 360 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 TAPBPO15533 448 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TBL1XO60907 577 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 PRSS23O95084 383 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 C7P10643 843 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 EPB42P16452 691 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 GSTM2P28161 218 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CDKN2CP42773 168 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CLCN7P51798 805 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CYP4F2P78329 520 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TRAF3Q13114 568 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 PLD3Q8IV08 490 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TRIB2Q92519 343 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 HDAC2Q92769 488 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TADA1Q96BN2 335 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 EID2BQ96D98 161 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 RUBCNLQ9H714 662 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 PDP1Q9P0J1 537 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 FNIP2Q9P278 1114 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 FBXO10Q9UK96 956 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 KRBA1A5PL33 1030 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ESR1P03372 595 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 GP2P55259 537 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 COLGALT2Q8IYK4 626 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ISG20Q96AZ6 181 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 MAGED4Q96JG8 741 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 DOK1Q99704 481 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 YTHDF1Q9BYJ9 559 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TMEM9Q9P0T7 183 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ABCG2Q9UNQ0 655 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 DHRS7Q9Y394 339 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 SLC38A8A6NNN8 435 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CPNE6O95741 557 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 COL6A1P12109 1028 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 BCKDHAP12694 445 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CCND3P30281 292 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 DGKEP52429 567 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ARHGDIAP52565 204 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 PLD1Q13393 1074 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 BOP1Q14137 746 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 MFSD14CQ5VZR4 134 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 Q6ZPB1 254 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 CEP68Q76N32 757 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TMEM173Q86WV6 379 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 DCP2Q8IU60 420 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 MSRB3Q8IXL7 192 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 TRUB1Q8WWH5 349 aaKnown RBP14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ALOXE3Q9BYJ1 711 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 ROGDIQ9GZN7 287 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 C8orf4Q9NR00 106 aa14.08□□□□□ -0.16
CPSF7-201ENST00000340437 FAM92AA1XBS5 289 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 PABPN1LA6NDY0 278 aaKnown RBP14.07□□□□□ -0.16
CPSF7-201ENST00000340437 KDELR3O43731 214 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 MTX2O75431 263 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 ALDH2P05091 517 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 OR1D2P34982 312 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 HPCAL1P37235 193 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 CDK5R2Q13319 367 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 DSC3Q14574 896 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 DPP10Q8N608 796 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 TUBA1CQ9BQE3 449 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 HMG20AQ9NP66 347 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 KPNA4O00629 521 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-201ENST00000340437 INHBBP09529 407 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 CTGFP29279 349 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 CLK1P49759 484 aaKnown RBP14.07□□□□□ -0.16
CPSF7-201ENST00000340437 CDH4P55283 916 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 GRIK2Q13002 908 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 CARD16Q5EG05 197 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 IRAK1BP1Q5VVH5 260 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 DACH2Q96NX9 599 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 C6orf62Q9GZU0 229 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-201ENST00000340437 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
CPSF7-201ENST00000340437 RFXANKO14593 260 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 COCHO43405 550 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 HALP42357 657 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CCL23P55773 120 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 PHC1P78364 1004 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ARF5P84085 180 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 CACNG1Q06432 222 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ANKS3Q6ZW76 656 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 OR5K1Q8NHB7 308 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
CPSF7-201ENST00000340437 NEURL2Q9BR09 285 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms