RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ULK1O75385 1050 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 TRMUO75648 421 aaKnown RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 IGSF6O95976 241 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 CDH1P12830 882 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 TUBA4AP68366 448 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 ZNF77Q15935 545 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 MPPE1Q53F39 396 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 SPANXN4Q5MJ08 99 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 SULT1C3Q6IMI6 304 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 RGL4Q8IZJ4 473 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 NXPE1Q8N323 547 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 OR10A6Q8NH74 314 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 FBXO30Q8TB52 745 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 BPIFB1Q8TDL5 484 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 OSCP1Q8WVF1 389 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 ZNF583Q96ND8 569 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 ZBTB18Q99592 522 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 LINC00597Q9H2U6 94 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 INTS6Q9UL03 887 aaKnown RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 PLXNB3Q9ULL4 1909 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 XIRP2A4UGR9 3374 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 DYTNA2CJ06 578 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 BMP10O95393 424 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 ANXA6P08133 673 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 FSHRP23945 695 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 CAPGP40121 348 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 YAP1P46937 504 aaKnown RBP15.93■□□□□ 0.14
LITAF-201ENST00000339430 FXNQ16595 210 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 CPSF6Q16630 551 aaKnown RBP eCLIP15.93■□□□□ 0.14
LITAF-201ENST00000339430 KCTD21Q4G0X4 260 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 SYCE2Q6PIF2 218 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 CRTC1Q6UUV9 634 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 SUSD1Q6UWL2 747 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 TMEM184AQ6ZMB5 413 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 DET1Q7L5Y6 550 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 GPR149Q86SP6 731 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 RIMKLAQ8IXN7 391 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 ASIC4Q96FT7 647 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 TBCDQ9BTW9 1192 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 BDH2Q9BUT1 245 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 DPY30Q9C005 99 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 CARS2Q9HA77 564 aaKnown RBP15.93■□□□□ 0.14
LITAF-201ENST00000339430 A0A087WXM4 84 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 KRT87PA6NCN2 255 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 EPB42P16452 691 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 SERPINA4P29622 427 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 MAPKAPK3Q16644 382 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 GTDC1Q4AE62 458 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 LRRC66Q68CR7 880 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 GRAMD4Q6IC98 578 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 ANKRD54Q6NXT1 300 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 MACC1Q6ZN28 852 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 NPAS3Q8IXF0 933 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 TNIP2Q8NFZ5 429 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 SKA2Q8WVK7 121 aaPredicted RBP15.93■□□□□ 0.14
LITAF-201ENST00000339430 GTF2H4Q92759 462 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 FGF13Q92913 245 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 ACDQ96AP0 544 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 NTN4Q9HB63 628 aa15.93■□□□□ 0.14
LITAF-201ENST00000339430 GSTA4O15217 222 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 SOCS5O75159 536 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GGT1P19440 569 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 VIPR2P41587 438 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GNPDA1P46926 289 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 CDK9P50750 372 aaKnown RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 PLEKHG6Q3KR16 790 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ATP13A5Q4VNC0 1218 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ENPP6Q6UWR7 440 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GET4Q7L5D6 327 aaPredicted RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 CHST15Q7LFX5 561 aaPredicted RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 TMEM25Q86YD3 366 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 CLVS1Q8IUQ0 354 aaPredicted RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 PHACTR4Q8IZ21 702 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ST13P5Q8NFI4 369 aaPredicted RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 OR2T12Q8NG77 320 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 OR2AP1Q8NGE2 309 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 TMBIM1Q969X1 311 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 LRRC3BQ96PB8 259 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 LRTM1Q9HBL6 345 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 TMEM45AQ9NWC5 275 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 MBD1Q9UIS9 605 aaPredicted RBP15.92■□□□□ 0.14
LITAF-201ENST00000339430 UTS2RQ9UKP6 389 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 WNT6Q9Y6F9 365 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GRXCR2A6NFK2 248 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 SLC28A1O00337 649 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 MANBAO00462 879 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GMNNO75496 209 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 STK16O75716 305 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 TCF3P15923 654 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 MSH3P20585 1137 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 AKT1P31749 480 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 IST1P53990 364 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 CRY1Q16526 586 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 TMEM259Q4ZIN3 620 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 FAM78AQ5JUQ0 283 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 MPP7Q5T2T1 576 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ABRAXAS1Q6UWZ7 409 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 GPR141Q7Z602 305 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ABCB8Q9NUT2 735 aa15.92■□□□□ 0.14
LITAF-201ENST00000339430 ARL15Q9NXU5 204 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms