RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LRRC70Q7Z2Q7 622 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SPATS2Q86XZ4 545 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FITM2Q8N6M3 262 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PPFIBP2Q8ND30 876 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR9A1PQ8NGU1 263 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CCL4L1Q8NHW4 92 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MAGEC3Q8TD91 643 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ATL1Q8WXF7 558 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 C12orf66Q96MD2 445 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 INSM2Q96T92 566 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TMEM168Q9H0V1 697 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 STN1Q9H668 368 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 WDR55Q9H6Y2 383 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PRDM8Q9NQV8 689 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 APOBEC2Q9Y235 224 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SLC22A14Q9Y267 594 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TDRKHQ9Y2W6 561 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TIMM22Q9Y584 194 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FANCMQ8IYD8 2048 aa14.35□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SPTY2D1-AS1A0A0U1RR47 76 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PDZK1P1A8MUH7 402 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MYO1CO00159 1063 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 KATNA1O75449 491 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PKNOX1P55347 436 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ERVPABLB-1P60509 514 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TRAF3Q13114 568 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PRKG2Q13237 762 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TUBB3Q13509 450 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 NAE1Q13564 534 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CLCA4Q14CN2 919 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 UGT3A2Q3SY77 523 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 KANK2Q63ZY3 851 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LETMD1Q6P1Q0 360 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TTC23LQ6PF05 361 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DCUN1D3Q8IWE4 304 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TMEFF1Q8IYR6 380 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SNX31Q8N9S9 440 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR4F6Q8NGB9 312 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR5K2Q8NHB8 316 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RAD51AP1Q96B01 352 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MED8Q96G25 268 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LRRC37BQ96QE4 947 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MIR1-1HGQ9H1L0 117 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 GPR27Q9NS67 375 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 INTS7Q9NVH2 962 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PLAGL1Q9UM63 463 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DNAJC15Q9Y5T4 150 aa14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TDRD6O60522 2096 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TRPC5OSA6NMA1 111 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OTCP00480 354 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TNFP01375 233 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 WNT1P04628 370 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 RPN2P04844 631 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 EPHA3P29320 983 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 PIK3CGP48736 1102 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FNTBP49356 437 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FZD2Q14332 565 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 UAP1L1Q3KQV9 507 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LAYNQ6UX15 382 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MILR1Q7Z6M3 343 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 CDYL2Q8N8U2 506 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 LMNTD1Q8N9Z9 388 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FAM174AQ8TBP5 190 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 ZNF480Q8WV37 535 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SKA1Q96BD8 255 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 OR52B2Q96RD2 323 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 FERD3LQ96RJ6 166 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 MYLK2Q9H1R3 596 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DNAJC11Q9NVH1 559 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 STK38LQ9Y2H1 464 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 DGKBQ9Y6T7 804 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 THADAQ6YHU6 1953 aa14.33□□□□□ -0.11
CDK5RAP3-201ENST00000338399 SDHDO14521 159 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 UROSP10746 265 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 EPORP19235 508 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CD38P28907 300 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ACTR1BP42025 376 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ACTR1AP61163 376 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LRP8Q14114 963 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GRB7Q14451 532 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 THOC6Q86W42 341 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SYTL1Q8IYJ3 562 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MFSD2AQ8NA29 543 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 OR56A3Q8NH54 315 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TWIST2Q8WVJ9 160 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCT6BQ92526 530 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ERP27Q96DN0 273 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TCF7L2Q9NQB0 619 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 IMP3Q9NV31 184 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms