RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
CMTM1-204ENST00000336328 UNC5DQ6UXZ4 953 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 ZNF534Q76KX8 674 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 ATCAYQ86WG3 371 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 RAB43Q86YS6 212 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 RAB42Q8N4Z0 105 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 PROKR1Q8TCW9 393 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 ZNF778Q96MU6 729 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 KLHL25Q9H0H3 589 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 INTS7Q9NVH2 962 aaKnown RBP17.13■□□□□ 0.33
CMTM1-204ENST00000336328 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 GNPTGQ9UJJ9 305 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
CMTM1-204ENST00000336328 MED13Q9UHV7 2174 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 ARGFXA6NJG6 315 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 TMEM63AO94886 807 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 SLCO2B1O94956 709 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 FGGP02679 453 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
CMTM1-204ENST00000336328 DCDP81605 110 aaKnown RBP17.12■□□□□ 0.33
CMTM1-204ENST00000336328 SSPNQ14714 243 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 NCF4Q15080 339 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 RHBDD2Q6NTF9 364 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 DCUN1D3Q8IWE4 304 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 ADAMTS17Q8TE56 1095 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 NDC1Q9BTX1 674 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 RAB11FIP5Q9BXF6 653 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 TRIM55Q9BYV6 548 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 FAM60AQ9NP50 221 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.12■□□□□ 0.33
CMTM1-204ENST00000336328 SLC39A10Q9ULF5 831 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 ZNF451Q9Y4E5 1061 aa17.12■□□□□ 0.33
CMTM1-204ENST00000336328 CEP104O60308 925 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 S1PR4O95977 384 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 CAPN1P07384 714 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 ZSCAN5DPP0CG00 497 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 CD9P21926 228 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 AOAHP28039 575 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 IL10RAQ13651 578 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 SIX1Q15475 284 aaPredicted RBP17.11■□□□□ 0.33
CMTM1-204ENST00000336328 PTCHD3Q3KNS1 767 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 ZC3H12BQ5HYM0 836 aaKnown RBP17.11■□□□□ 0.33
CMTM1-204ENST00000336328 MLIPQ5VWP3 458 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 DNAJC22Q8N4W6 341 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 RAD51AP1Q96B01 352 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 TCF12Q99081 682 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 NRTNQ99748 197 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 MRM3Q9HC36 420 aaKnown RBP17.11■□□□□ 0.33
CMTM1-204ENST00000336328 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 SPHK1Q9NYA1 384 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 NDOR1Q9UHB4 597 aa17.11■□□□□ 0.33
CMTM1-204ENST00000336328 H3BMM5 538 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 ZSCAN9O15535 394 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 DNAJB5O75953 348 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 TPBGLP0DKB5 382 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 NR1D1P20393 614 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 RPS3P23396 243 aaKnown RBP eCLIP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 PTGIRP43119 386 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 ARSFP54793 590 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 IGFBP7Q16270 282 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 PAPD7Q5XG87 772 aaKnown RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 MICALCLQ6ZW33 695 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 OTOAQ7RTW8 1153 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 LRRC8AQ8IWT6 810 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 GLIS1Q8NBF1 620 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 OR2L8Q8NGY9 312 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 DLG3Q92796 817 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 ZUFSPQ96AP4 578 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 FER1L6-AS2Q96M78 137 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 KIFC1Q9BW19 673 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 SPRTNQ9H040 489 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 TREX1Q9NSU2 369 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
CMTM1-204ENST00000336328 CDYLQ9Y232 598 aa17.1■□□□□ 0.33
CMTM1-204ENST00000336328 MAGEB16A2A368 324 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 K7EM74 188 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 PEX12O00623 359 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 DPM1O60762 260 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 TPSB2P20231 275 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 PKLRP30613 574 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 CCNFP41002 786 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 GABRA4P48169 554 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
CMTM1-204ENST00000336328 SF1Q15637 639 aaKnown RBP17.09■□□□□ 0.33
CMTM1-204ENST00000336328 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms