RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZBTB26Q9HCK0 441 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PREBQ9HCU5 417 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 SLC27A6Q9Y2P4 619 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 AXIN2Q9Y2T1 843 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NUDT19A8MXV4 375 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 GABBR2O75899 941 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PRKACBP22694 351 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PBLDP30039 288 aaPredicted RBP5.43□□□□□ -1.54
PTPRB-202ENST00000334414 RGS19P49795 217 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 KCNC3Q14003 757 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 PIGGQ5H8A4 983 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 OR8J3Q8NGG0 315 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 OR10T2Q8NGX3 314 aa5.43□□□□□ -1.54
PTPRB-202ENST00000334414 TTLL8A6PVC2 850 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ITM2AO43736 263 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PRAMEF2O60811 474 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 YBX3P16989 372 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RPS3P23396 243 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 AZGP1P25311 298 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CHATP28329 748 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HMGCS2P54868 508 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 VSX2P58304 361 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SP140Q13342 867 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TGFBIQ15582 683 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 C3P1Q6ZMU1 363 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 REPS2Q8NFH8 660 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR7G2Q8NG99 324 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ADAMTS15Q8TE58 950 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ZBED6CLQ96FA7 236 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR14A2Q96R54 314 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TPK1Q9H3S4 243 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TFB2MQ9H5Q4 396 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HSPB11Q9Y547 144 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ABHD14A-ACY1A0A1B0GW23 586 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR2B3O76000 313 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PAHP00439 452 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 LAMP2P13473 410 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 NOMO3P69849 1222 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CLCQ05315 142 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 BAATQ14032 418 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SIM2Q14190 667 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CBX2Q14781 532 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GRK1Q15835 563 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ASB18Q6ZVZ8 466 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PLD6Q8N2A8 252 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR8K5Q8NH50 307 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OSTF1Q92882 214 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM169Q96HH4 297 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 EGFL7Q9UHF1 273 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UQCRC1P31930 480 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR1G1P47890 313 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FKBP1AP62942 108 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBE2R2Q712K3 238 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HS3ST5Q8IZT8 346 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR2AJ1Q8NGZ0 328 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HNRNPABQ99729 332 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FEM1AQ9BSK4 669 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FUZQ9BT04 418 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HEBP1Q9NRV9 189 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TMPRSS11EQ9UL52 423 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PAK4O96013 591 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ALPPP05187 535 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RHDQ02161 417 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SLC18A2Q05940 514 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MAD2L1BPQ15013 274 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MPP7Q5T2T1 576 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2IRD2BQ6EKJ0 949 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RTL6Q6ICC9 239 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GDPGP1Q6ZNW5 385 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2IRD2Q86UP8 949 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SIMC1Q8NDZ2 872 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ELL3Q9HB65 397 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 POPDC3Q9HBV1 291 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SLCO1B3Q9NPD5 702 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PNPOQ9NVS9 261 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SLC7A8Q9UHI5 535 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TECPR2O15040 1411 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RGS9O75916 674 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 POMCP01189 267 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CKMP06732 381 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PTPN9P43378 593 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TAGLNQ01995 201 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ARL6IP1Q15041 203 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FAM35AQ86V20 835 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 LRRC52Q8N7C0 313 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ATAD1Q8NBU5 361 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 AARSD1Q9BTE6 412 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 DUSP16Q9BY84 665 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 NKIRAS2Q9NYR9 191 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 BTRCQ9Y297 605 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RFPL2O75678 378 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OXSR1O95747 527 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HLA-EP13747 358 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MAP3K8P41279 467 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TAS2R31P59538 309 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 BNIP3Q12983 259 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms