RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DLSTP36957 453 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 MC1RQ01726 317 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 SYT10Q6XYQ8 523 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 DENND6AQ8IWF6 608 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 EXTL1Q92935 676 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 ARHGAP9Q9BRR9 750 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 NAT9Q9BTE0 207 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 RAB11FIP5Q9BXF6 653 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 CCDC68Q9H2F9 335 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 LHX9Q9NQ69 397 aa26.7■■□□□ 1.86
ATPAF1-201ENST00000329231 A0A0J9YY10 115 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 TMEM150CB9EJG8 249 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 SMAPO00193 183 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 TTC4O95801 387 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 CTBP1Q13363 440 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 MORF4L2Q15014 288 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 SLC5A12Q1EHB4 618 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 ZNF789Q5FWF6 425 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 TRIM73Q86UV7 250 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 ZBTB2Q8N680 514 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 C19orf47Q8N9M1 422 aaKnown RBP26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 STARD8Q92502 1023 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 RAD51AP1Q96B01 352 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 SLC22A18Q96BI1 424 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 FAM136AQ96C01 138 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 TCTN2Q96GX1 697 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 CATSPER2Q96P56 530 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 EBNA1BP2Q99848 306 aaKnown RBP26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 FAM167BQ9BTA0 163 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 MENTQ9BUN1 341 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 SERTAD3Q9UJW9 196 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 KCND3Q9UK17 655 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 SLC39A10Q9ULF5 831 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 PCDHB3Q9Y5E6 796 aa26.69■■□□□ 1.86
ATPAF1-201ENST00000329231 PRB1P04280 392 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 CD9P21926 228 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 CCNFP41002 786 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 SLC1A2P43004 574 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 DHX9Q08211 1270 aaKnown RBP26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 LY6DQ14210 128 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 GRB7Q14451 532 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 GBX1Q14549 363 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 TBR1Q16650 682 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 LINC00303Q3SY05 128 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 RAB42Q8N4Z0 105 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 FLVCR1-AS1Q8TAF5 88 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 GABPB2Q8TAK5 448 aaPredicted RBP26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 MAGEC3Q8TD91 643 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 CHRNA10Q9GZZ6 450 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 FBXO6Q9NRD1 293 aaPredicted RBP26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 FBXO5Q9UKT4 447 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 NFS1Q9Y697 457 aa26.68■■□□□ 1.86
ATPAF1-201ENST00000329231 RASGRF2O14827 1237 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 NKX2-8O15522 239 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 C1orf105O95561 183 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 CRYMQ14894 314 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 CRTC2Q53ET0 693 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 HSP90AA5PQ58FG0 334 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 CDHR3Q6ZTQ4 885 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 KCNMB4Q86W47 210 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 PDIK1LQ8N165 341 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 LINC01555Q8NAE3 123 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 OR2L8Q8NGY9 312 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 OR1L3Q8NH93 324 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 N4BP2L2Q92802 583 aaPredicted RBP26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 CIDEBQ9UHD4 219 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 COMMD10Q9Y6G5 202 aa26.67■■□□□ 1.86
ATPAF1-201ENST00000329231 C21orf140B9A014 251 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 TERTO14746 1132 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 TTI1O43156 1089 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 TCN2P20062 427 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 CYP2A7P20853 494 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 F8A1P23610 371 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 PEBP1P30086 187 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 TTLL9Q3SXZ7 439 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 BBS9Q3SYG4 887 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 CNSTQ6PJW8 725 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 MED8Q96G25 268 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 IL17FQ96PD4 163 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 KLHL42Q9P2K6 505 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 GALPQ9UBC7 116 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 RUVBL2Q9Y230 463 aaKnown RBP26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 PCDHGA6Q9Y5G7 932 aa26.66■■□□□ 1.86
ATPAF1-201ENST00000329231 KATNA1O75449 491 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 MATN4O95460 622 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 KLK3P07288 261 aaPredicted RBP26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 PRKAR1AP10644 381 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 BDKRB1P46663 353 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 CLCN7P51798 805 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 ITGA1P56199 1179 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 C19orf57Q0VDD7 668 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 CDC20Q12834 499 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 DNASE1L3Q13609 305 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 MSS51Q4VC12 460 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 SPANXN3Q5MJ09 141 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 BORAQ6PGQ7 559 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 CT55Q8WUE5 264 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 KCNJ9Q92806 393 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 LRFN5Q96NI6 719 aa26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 TRIM51Q9BSJ1 452 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms