RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ACVR1Q04771 509 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 IRF3Q14653 427 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 GTDC1Q4AE62 458 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 SIRPB2Q5JXA9 342 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 LBX2Q6XYB7 198 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 ZDHHC21Q8IVQ6 265 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 TTC9Q92623 222 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 PITX2Q99697 317 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 DHRS9Q9BPW9 319 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 CENPOQ9BU64 300 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
CCDC60-201ENST00000327554 ABCG2Q9UNQ0 655 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 LCHNA4D1U4 455 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 E9PQ18 207 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 ARVCFO00192 962 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 E2F3O00716 465 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 MUSKO15146 869 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 PNPLA4P41247 253 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 GZMMP51124 257 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 MAXP61244 160 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 CXCL9Q07325 125 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 SLAMF1Q13291 335 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
CCDC60-201ENST00000327554 SV2CQ496J9 727 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 RFTN2Q52LD8 501 aaPredicted RBP12.51□□□□□ -0.41
CCDC60-201ENST00000327554 MANEALQ5VSG8 457 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 KIAA1614Q5VZ46 1190 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 AFMIDQ63HM1 303 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 LETMD1Q6P1Q0 360 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 NOXA1Q86UR1 476 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 RAB43Q86YS6 212 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 FAM20CQ8IXL6 584 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 COPS4Q9BT78 406 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 RPRD1BQ9NQG5 326 aaKnown RBP12.51□□□□□ -0.41
CCDC60-201ENST00000327554 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
CCDC60-201ENST00000327554 TRBV5-3A0A0A0MS03 114 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 TLL1O43897 1013 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 UGT2B17O75795 530 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 PRSS56P0CW18 603 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 ITGA2P17301 1181 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 SLC19A1P41440 591 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 HK3P52790 923 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 LILRA4P59901 499 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 GTF2H3Q13889 308 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 GCNT7Q6ZNI0 430 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 SETD6Q8TBK2 473 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 BHMTQ93088 406 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 TMCO6Q96DC7 493 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF382Q96SR6 550 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 SYTL2Q9HCH5 934 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 SLC6A13Q9NSD5 602 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 PCDHGB2Q9Y5G2 931 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 MEIOCA2RUB1 952 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 CTDSP2O14595 271 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 PGK2P07205 417 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 YES1P07947 543 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 ATXN1LP0C7T5 689 aaKnown RBP12.5□□□□□ -0.41
CCDC60-201ENST00000327554 CA5AP35218 305 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 HTR2BP41595 481 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 DSC2Q02487 901 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 PTGR1Q14914 329 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 NR6A1Q15406 480 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 AP5B1Q2VPB7 878 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 FAM174BQ3ZCQ3 159 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 WSCD1Q658N2 575 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 OR2T5Q6IEZ7 315 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 IL27RAQ6UWB1 636 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 OR2T29Q8NH02 315 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
CCDC60-201ENST00000327554 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-201ENST00000327554 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 PLXNB2O15031 1838 aa12.5□□□□□ -0.41
CCDC60-201ENST00000327554 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-201ENST00000327554 RHOBTB1O94844 696 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 LGALS2P05162 132 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 CAPN1P07384 714 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 PRKACBP22694 351 aa12.49□□□□□ -0.41
CCDC60-201ENST00000327554 IGFBP6P24592 240 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms