RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ZUFSPQ96AP4 578 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TIFAQ96CG3 184 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ACPTQ9BZG2 426 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 USP22Q9UPT9 525 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DHRS12A0PJE2 317 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DYTNA2CJ06 578 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ANTXRLA6NF34 631 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 HEPACAM2A8MVW5 462 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CLGNO14967 610 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SLCO2B1O94956 709 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 NFATC1O95644 943 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PRNPP04156 253 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 JAK1P23458 1154 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 PBLDP30039 288 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 MTPNP58546 118 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PDK3Q15120 406 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CYP51A1Q16850 503 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 MTX3Q5HYI7 312 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TBCELQ5QJ74 424 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 LDLRAP1Q5SW96 308 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CACHD1Q5VU97 1274 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DLEU7Q6UYE1 221 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 GET4Q7L5D6 327 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 TRIM74Q86UV6 250 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 KRTCAP2Q8N6L1 136 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SMARCD2Q92925 531 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CIB1Q99828 191 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DPY30Q9C005 99 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TRIM15Q9C019 465 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 COQ10BQ9H8M1 238 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 RAD18Q9NS91 495 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TMEM45AQ9NWC5 275 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 C1orf109Q9NX04 203 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 TBC1D3BA6NDS4 549 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 AQP12BA6NM10 295 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PRAMEF4O60810 478 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ATG13O75143 517 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 NPPAP01160 153 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ZNF26P17031 533 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 CKMT2P17540 419 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PSMA4P25789 261 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 OXTRP30559 389 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 HALP42357 657 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SLC6A12P48065 614 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 AP1S2P56377 157 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SP140Q13342 867 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 HNRNPA1L2Q32P51 320 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 SPANXN4Q5MJ08 99 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 C6orf52Q5T4I8 152 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 C9orf64Q5T6V5 341 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PRAMEF9Q5VWM5 478 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 LCN8Q6JVE9 175 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PDE12Q6L8Q7 609 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 TMEM220Q6QAJ8 160 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SUSD1Q6UWL2 747 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ISLR2Q6UXK2 745 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 AQP12AQ8IXF9 295 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DPP10Q8N608 796 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PIP4K2CQ8TBX8 421 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 HCAR2Q8TDS4 363 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 DUS3LQ96G46 650 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 ZBTB18Q99592 522 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SLC29A3Q9BZD2 475 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CCM2LQ9NUG4 571 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 DNAJC11Q9NVH1 559 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SNX6Q9UNH7 406 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 AP4B1Q9Y6B7 739 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SCN8AQ9UQD0 1980 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 MTCL1Q9Y4B5 1905 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 FAM149AA5PLN7 773 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ARHGEF33A8MVX0 844 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 K7ESM1 405 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ARNTLO00327 626 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 QSOX1O00391 747 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 SLC16A5O15375 505 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 RECQL5O94762 991 aaPredicted RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 CAPNS1P04632 268 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PGRP06401 933 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 BCKDHAP12694 445 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PSMC3P17980 439 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 IL10P22301 178 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 FSHRP23945 695 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PDHA2P29803 388 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PFN3P60673 137 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 CHIT1Q13231 466 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 INPP5AQ14642 412 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 KIAA0040Q15053 153 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 CCSMST1Q4G0I0 132 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 TMEM259Q4ZIN3 620 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 OR52E8Q6IFG1 317 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 HMBOX1Q6NT76 420 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 TTC23LQ6PF05 361 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 VN1R2Q8NFZ6 395 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 SLC13A3Q8WWT9 602 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 OR8D1Q8WZ84 308 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 DTD2Q96FN9 168 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms