RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 MIB2Q96AX9 1013 aa15.02■□□□□ -0
FOXR1-201ENST00000317011 CLIP3Q96DZ5 547 aa15.02■□□□□ -0
FOXR1-201ENST00000317011 KLHL25Q9H0H3 589 aa15.02■□□□□ -0
FOXR1-201ENST00000317011 ING2Q9H160 280 aa15.02■□□□□ -0
FOXR1-201ENST00000317011 TREX1Q9NSU2 369 aa15.02■□□□□ -0
FOXR1-201ENST00000317011 F8W8V4 182 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 KIF2AO00139 706 aaPredicted RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 APRTP07741 180 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 CYP2A7P20853 494 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 AOAHP28039 575 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 PPARGP37231 505 aaPredicted RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 NPY2RP49146 381 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 KIR2DS3Q14952 304 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 FASTKD1Q53R41 847 aaKnown RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 COLEC12Q5KU26 742 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 RHBDD2Q6NTF9 364 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 C19orf47Q8N9M1 422 aaKnown RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 TEX19Q8NA77 164 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 OR6P1Q8NGX9 317 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 ASZ1Q8WWH4 475 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 OSBPL9Q96SU4 736 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 DHRS4Q9BTZ2 278 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 SPRTNQ9H040 489 aaPredicted RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 P2RY12Q9H244 342 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 MARCH4Q9P2E8 410 aaPredicted RBP15.01□□□□□ -0.01
FOXR1-201ENST00000317011 SNX12Q9UMY4 172 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 PCDHGB7Q9Y5F8 929 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 AP1M2Q9Y6Q5 423 aa15.01□□□□□ -0.01
FOXR1-201ENST00000317011 A0A0J9YY10 115 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 CYSRT1A8MQ03 144 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 E7EVH7 732 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 PRMT5O14744 637 aaPredicted RBP15□□□□□ -0.01
FOXR1-201ENST00000317011 PRICKLE3O43900 615 aaPredicted RBP15□□□□□ -0.01
FOXR1-201ENST00000317011 CEP104O60308 925 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 ONECUT2O95948 504 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 SRSF1Q07955 248 aaKnown RBP eCLIP15□□□□□ -0.01
FOXR1-201ENST00000317011 NCF4Q15080 339 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 CPZQ66K79 652 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 TRIM73Q86UV7 250 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 CCDC89Q8N998 374 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 LINC01555Q8NAE3 123 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 LKAAEAR1Q8TD35 194 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 GBP5Q96PP8 586 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 KIFC1Q9BW19 673 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 SNX7Q9UNH6 387 aa15□□□□□ -0.01
FOXR1-201ENST00000317011 IQCF5A8MTL0 148 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 AP3B1O00203 1094 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CD3EAPO15446 510 aaKnown RBP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 ZNF500O60304 480 aaPredicted RBP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CTSBP07858 339 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CBSLP0DN79 551 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 RPS3P23396 243 aaKnown RBP eCLIP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 ARNTP27540 789 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PKLRP30613 574 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CBSP35520 551 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PTGIRP43119 386 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 RAB28P51157 221 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CCL11P51671 97 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PRAMEP78395 509 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 CDK16Q00536 496 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 HSPA14Q0VDF9 509 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 SSPNQ14714 243 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PTCHD3Q3KNS1 767 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 FAM69BQ5VUD6 431 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 TLDC1Q6P9B6 456 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 UNC5DQ6UXZ4 953 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 MED25Q71SY5 747 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 GPR135Q8IZ08 494 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 TMEM102Q8N9M5 508 aaPredicted RBP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 COG1Q8WTW3 980 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PBKQ96KB5 322 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 SLC25A23Q9BV35 468 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 IL22Q9GZX6 179 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PLAAQ9Y263 795 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 TDRKHQ9Y2W6 561 aaKnown RBP14.99□□□□□ -0.01
FOXR1-201ENST00000317011 SAR1BQ9Y6B6 198 aa14.99□□□□□ -0.01
FOXR1-201ENST00000317011 PTPN13Q12923 2485 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 ARGFXA6NJG6 315 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 ZNF185O15231 689 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 KDM1AO60341 852 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 OR2B3O76000 313 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 TMEM63AO94886 807 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 TUBB4AP04350 444 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 CD63P08962 238 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 TCP1P17987 556 aaKnown RBP14.98□□□□□ -0.01
FOXR1-201ENST00000317011 AGXTP21549 392 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 CD9P21926 228 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 TTPAP49638 278 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 UBAP2LQ14157 1087 aaKnown RBP14.98□□□□□ -0.01
FOXR1-201ENST00000317011 AARS2Q5JTZ9 985 aaKnown RBP14.98□□□□□ -0.01
FOXR1-201ENST00000317011 ARMC3Q5W041 872 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 MRPL14Q6P1L8 145 aaKnown RBP14.98□□□□□ -0.01
FOXR1-201ENST00000317011 LRRC8BQ6P9F7 803 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 MPP5Q8N3R9 675 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 PPHLN1Q8NEY8 458 aaKnown RBP14.98□□□□□ -0.01
FOXR1-201ENST00000317011 PROKR1Q8TCW9 393 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 MAIP1Q8WWC4 291 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 CAPZA3Q96KX2 299 aa14.98□□□□□ -0.01
FOXR1-201ENST00000317011 ZNF285Q96NJ3 590 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms