RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SIRPAP78324 504 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 SRSF4Q08170 494 aaKnown RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 MZT1Q08AG7 82 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 KLF9Q13886 244 aaPredicted RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 E2F5Q15329 346 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 SLC15A2Q16348 729 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 CAMK4Q16566 473 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 DECR1Q16698 335 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 MANEAQ5SRI9 462 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 DCST1Q5T197 706 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 FRG2Q64ET8 278 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 FIGLAQ6QHK4 219 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 NANOGP1Q8N7R0 232 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 LINC00301Q8NCQ3 95 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 OR5R1Q8NH85 324 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 PIGOQ8TEQ8 1089 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 NTN5Q8WTR8 489 aaPredicted RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 INTS14Q96SY0 518 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 SEMA3CQ99985 751 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 FOXP1Q9H334 677 aaPredicted RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 ANKZF1Q9H8Y5 726 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 MBNL1Q9NR56 388 aaKnown RBP3.93□□□□□ -1.78
SMCO3-201ENST00000316048 TCP11L1Q9NUJ3 509 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 OSER1Q9NX31 292 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 RHCGQ9UBD6 479 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 PCDHA7Q9UN72 937 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 PTGDR2Q9Y5Y4 395 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 HS3ST3B1Q9Y662 390 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 TIAM2Q8IVF5 1701 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 CACNA1SQ13698 1873 aa3.93□□□□□ -1.78
SMCO3-201ENST00000316048 DUOX1Q9NRD9 1551 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 INAFM1C9JVW0 142 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 H0YAE9 185 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TRIM77I1YAP6 450 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TNFRSF13BO14836 293 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SPINT2O43291 252 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 MMP1P03956 469 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PFKFB1P16118 471 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SSTR2P30874 369 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 STX2P32856 288 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 RAB28P51157 221 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TROAPQ12815 778 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 GPS2Q13227 327 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PPP2R5CQ13362 524 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF273Q14593 569 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SLC39A14Q15043 492 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ZRSR1Q15695 479 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CTF1Q16619 201 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SYT16Q17RD7 645 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 KRTCAP3Q53RY4 240 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 MTX3Q5HYI7 312 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 FNBP1LQ5T0N5 605 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ARMC4Q5T2S8 1044 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 C18orf63Q68DL7 685 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 KCTD18Q6PI47 426 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 RAD9BQ6WBX8 426 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 IRF2BP2Q7Z5L9 587 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 TMEM173Q86WV6 379 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PRIMA1Q86XR5 153 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CCDC170Q8IYT3 715 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ARFGAP1Q8N6T3 406 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 OR2AJ1Q8NGZ0 328 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 C16orf52Q8NHV5 167 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 MR1Q95460 341 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ERLEC1Q96DZ1 483 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SPACA9Q96E40 222 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 DACH2Q96NX9 599 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CITED2Q99967 270 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 LZTS2Q9BRK4 669 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 C16orf70Q9BSU1 422 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SLC25A23Q9BV35 468 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 MRIQ9BWK5 157 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CLSTN2Q9H4D0 955 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 NOL11Q9H8H0 719 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 C17orf75Q9HAS0 396 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 RNF150Q9ULK6 438 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CHD4Q14839 1912 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 OR6C76A6NM76 312 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 HEPACAM2A8MVW5 462 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PI4K2BG5E9Z4 385 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CH25HO95992 272 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 DDX5P17844 614 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CMA1P23946 247 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 NR2F2P24468 414 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ABATP80404 500 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SRSF1Q07955 248 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 SMN1Q16637 294 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ZRANB3Q5FWF4 1079 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PPP6R3Q5H9R7 873 aaPredicted RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 FAM69BQ5VUD6 431 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF534Q76KX8 674 aa3.92□□□□□ -1.78
SMCO3-201ENST00000316048 CHERPQ8IWX8 916 aaKnown RBP3.92□□□□□ -1.78
SMCO3-201ENST00000316048 KCNE4Q8WWG9 221 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms