RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 FKBP9O95302 570 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 ZNF865P0CJ78 1059 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 HSMCR30P0CW71 290 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 SMIM10L2AP0DMW4 78 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 SMIM10L2BP0DMW5 78 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 M6PRP20645 277 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 CXCR4P61073 352 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 TP53BP2Q13625 1128 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 SLC14A2Q15849 920 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 TRIM60Q495X7 471 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 MORN1Q5T089 497 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 SYCE2Q6PIF2 218 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 TTC29Q8NA56 475 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 GLB1L3Q8NCI6 653 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 UBASH3BQ8TF42 649 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 NT5C3BQ969T7 300 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 GLOD4Q9HC38 313 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 GRIP1Q9Y3R0 1128 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 TRIP12Q14669 1992 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 OR6C70A6NIJ9 312 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 RPLP0P05388 317 aaKnown RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 G6PDP11413 515 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 UQCRC1P31930 480 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 FLT3LGP49771 235 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 GRIK2Q13002 908 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 SEMA3BQ13214 749 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 MAD2L1BPQ15013 274 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 PARP15Q460N3 678 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 CAPN13Q6MZZ7 669 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 ZNF467Q7Z7K2 595 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 ZNF548Q8NEK5 533 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 KBTBD8Q8NFY9 601 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 EMID1Q96A84 441 aaPredicted RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 PDLIM5Q96HC4 596 aaKnown RBP17.66■□□□□ 0.42
SPSB4-201ENST00000310546 GDF15Q99988 308 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 COPS4Q9BT78 406 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 ZIM2Q9NZV7 527 aa17.66■□□□□ 0.42
SPSB4-201ENST00000310546 ELOVL7A1L3X0 281 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 MANSC4A6NHS7 340 aaPredicted RBP17.65■□□□□ 0.42
SPSB4-201ENST00000310546 HMX3A6NHT5 357 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 ARVCFO00192 962 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SCO1O75880 301 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TSPAN9O75954 239 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SNX4O95219 450 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 PRR35P0CG20 571 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 PON2Q15165 354 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 GPAT3Q53EU6 434 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 ZC3H12BQ5HYM0 836 aaKnown RBP17.65■□□□□ 0.42
SPSB4-201ENST00000310546 KIAA0319Q5VV43 1072 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 GCNT7Q6ZNI0 430 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 VN1R5Q7Z5H4 357 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 FBXO39Q8N4B4 442 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 DPP10Q8N608 796 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 LINC01465Q8N7H1 131 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TMCO6Q96DC7 493 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 CCDC120Q96HB5 630 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SLC30A2Q9BRI3 323 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 RANBP2P49792 3224 aaKnown RBP17.65■□□□□ 0.42
SPSB4-201ENST00000310546 CDH23Q9H251 3354 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 ENPP3O14638 875 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TLL1O43897 1013 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 DIRAS1O95057 198 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SERPINA1P01009 418 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 RFX2P48378 723 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 AGTR2P50052 363 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 DAPP51397 102 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 IRF3Q14653 427 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 RBBP7Q16576 425 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 PXDC1Q5TGL8 231 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 CEP68Q76N32 757 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SYVN1Q86TM6 617 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TRIM48Q8IWZ4 208 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SDR16C5Q8N3Y7 309 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 CDYL2Q8N8U2 506 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 NFKBIZQ9BYH8 718 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 NXF2Q9GZY0 626 aaKnown RBP17.65■□□□□ 0.42
SPSB4-201ENST00000310546 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 A3GALT2U3KPV4 340 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 ARHGAP33O14559 1287 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 ITGA2P17301 1181 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 SNRPD2P62316 118 aaKnown RBP17.65■□□□□ 0.42
SPSB4-201ENST00000310546 IDO2Q6ZQW0 420 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 PHACTR4Q8IZ21 702 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TTC16Q8NEE8 873 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 TRPV1Q8NER1 839 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 CDK15Q96Q40 435 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 FCRL5Q96RD9 977 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 PRKD2Q9BZL6 878 aa17.65■□□□□ 0.42
SPSB4-201ENST00000310546 NOS1APO75052 506 aaPredicted RBP17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF780AO75290 641 aaPredicted RBP17.64■□□□□ 0.41
SPSB4-201ENST00000310546 POLR2CP19387 275 aaPredicted RBP17.64■□□□□ 0.41
SPSB4-201ENST00000310546 HNF4AP41235 474 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 IL12RB1P42701 662 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ARSDP51689 593 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 CREMQ03060 361 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 PWP1Q13610 501 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms