RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.19□□□□□ -1.13e-6■■■■□ 23.5
PPARGC1B-201ENST00000309241 HTR2AP28223 471 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 GRIK2Q13002 908 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 RPL13AP3Q6NVV1 102 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 SMPDL3BQ92485 455 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 MIPEPQ99797 713 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 EBNA1BP2Q99848 306 aaKnown RBP8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 EVA1AQ9H8M9 152 aa8.19□□□□□ -1.1
PPARGC1B-201ENST00000309241 CLCA1A8K7I4 914 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PPEF2O14830 753 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 FSCN2O14926 492 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 OIP5O43482 229 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC1A2P43004 574 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 AP1S1P61966 158 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PCDH1Q08174 1060 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PTGR1Q14914 329 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 WSCD2Q2TBF2 565 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 FKBP1CQ5VVH2 108 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC47A1Q96FL8 570 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 A0A1B0GVI7 797 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 GRM6O15303 877 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC6A2P23975 617 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 EPHA3P29320 983 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 VGLL4Q14135 290 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TPRG1LQ5T0D9 272 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RGMBQ6NW40 437 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TCEAL4Q96EI5 215 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 OR12D3Q9UGF7 316 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC7A8Q9UHI5 535 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RFPL2O75678 378 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 UGT2B17O75795 530 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CST1P01037 141 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CYP3A5P20815 502 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 AVPR1BP47901 424 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PRSS58Q8IYP2 241 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ANKFN1Q8N957 763 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 MKRN2Q9H000 416 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DUS2Q9NX74 493 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF487B1APH4 448 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 C9P02748 559 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ARL6IP1Q15041 203 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 C16orf46Q6P387 395 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 FBXO30Q8TB52 745 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DNAJB14Q8TBM8 379 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 C10orf82Q8WW14 230 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 BEX2Q9BXY8 128 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SEMA4BQ9NPR2 832 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 EBF1Q9UH73 591 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PCM1Q15154 2024 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CD40LGP29965 261 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 HSD17B2P37059 387 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CXCL9Q07325 125 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 C2orf80Q0P641 193 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RIN1Q13671 783 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DPYSL3Q14195 570 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SGCBQ16585 318 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 FAM199XQ6PEV8 388 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 GPR180Q86V85 440 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF431Q8TF32 576 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PEX13Q92968 403 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 C18orf25Q96B23 403 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RAP2AP10114 183 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PTPRMP28827 1452 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 EIF1AXP47813 144 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 MARCKSL1P49006 195 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 GPRIN3Q6ZVF9 776 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TNFAIP8L1Q8WVP5 186 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC5A5Q92911 643 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 LPPQ93052 612 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF416Q9BWM5 594 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CST11Q9H112 138 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 BPIFA1Q9NP55 256 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 XPR1Q9UBH6 696 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CNOT6Q9ULM6 557 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PEX12O00623 359 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SCNN1AP37088 669 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 BLKP51451 505 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC6A3Q01959 620 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SNAPC1Q16533 368 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CES3Q6UWW8 571 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DNAJA4Q8WW22 397 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CGREF1Q99674 301 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 AIF1LQ9BQI0 150 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZFP14Q9HCL3 533 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PER2O15055 1255 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms