RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SYTL2Q9HCH5 934 aa16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 FAM60AQ9NP50 221 aa16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 LATS2Q9NRM7 1088 aa16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 RUVBL2Q9Y230 463 aaKnown RBP16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 POLHQ9Y253 713 aa16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 CRYL1Q9Y2S2 319 aa16.46■□□□□ 0.23
HMGCLL1-202ENST00000308161 A0A0J9YY10 115 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 GOLGA6L10A0A0M3HER8 536 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 E7EQ34 232 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 MEN1O00255 615 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PFDN6O15212 129 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF185O15231 689 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PHF2O75151 1096 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 NIPSNAP2O75323 286 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 F7P08709 466 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 SPTBP11277 2137 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PKLRP30613 574 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 RAB28P51157 221 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 ITGA1P56199 1179 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PTCHD3Q3KNS1 767 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CTSL3PQ5NE16 218 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CAND1Q86VP6 1230 aaKnown RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 LRRC6Q86X45 466 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 GPR135Q8IZ08 494 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 C9orf43Q8TAL5 461 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 SLC39A10Q9ULF5 831 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 MAN2B2Q9Y2E5 1009 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 KLHL20Q9Y2M5 609 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PCDHGA6Q9Y5G7 932 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 BSNQ9UPA5 3926 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF749O43361 778 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 SLCO2B1O94956 709 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 RPS3P23396 243 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PTPN4P29074 926 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 MAGEA6P43360 314 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 BDKRB1P46663 353 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 DHX34Q14147 1143 aaKnown RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 KIR2DS3Q14952 304 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PPP1R7Q15435 360 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZIC1Q15915 447 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CYP1B1Q16678 543 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CRTC2Q53ET0 693 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PLEKHS1Q5SXH7 462 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 RNF187Q5TA31 235 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 TTC23LQ6PF05 361 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 UNC5DQ6UXZ4 953 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 SYTL1Q8IYJ3 562 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 GRK7Q8WTQ7 553 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 LPGAT1Q92604 370 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 TCTN2Q96GX1 697 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 GPR87Q9BY21 358 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 PCMTD2Q9NV79 361 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 FARSAQ9Y285 508 aaKnown RBP16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 KCNMB2Q9Y691 235 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 NFS1Q9Y697 457 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
HMGCLL1-202ENST00000308161 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 KRT87PA6NCN2 255 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 SDR42E2A6NKP2 422 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 KPNA5O15131 536 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 HCRTR1O43613 425 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 OR2B3O76000 313 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 CHRM3P20309 590 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 THOC5Q13769 683 aaKnown RBP16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 KYNUQ16719 465 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 TYSND1Q2T9J0 566 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 FAM69BQ5VUD6 431 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF470Q6ECI4 717 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 NEPROQ6NW34 567 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 DSELQ8IZU8 1212 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 ENDOVQ8N8Q3 282 aaKnown RBP16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 LINC01555Q8NAE3 123 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 FLVCR1-AS1Q8TAF5 88 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 ACTRT1Q8TDG2 376 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 ANP32BQ92688 251 aaKnown RBP16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 ABHD17AQ96GS6 310 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 SERPINB12Q96P63 405 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 SPRTNQ9H040 489 aaPredicted RBP16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 XAB2Q9HCS7 855 aaKnown RBP16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 TUBD1Q9UJT1 453 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 SNX7Q9UNH6 387 aa16.44■□□□□ 0.22
HMGCLL1-202ENST00000308161 E5RI56 91 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 MSL3P1P0C860 447 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 MLNP12872 115 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 OGNP20774 298 aaKnown RBP16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 MAGP20916 626 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 CD9P21926 228 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 IL10RAQ13651 578 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 SLC5A12Q1EHB4 618 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 CCSMST1Q4G0I0 132 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 ANKRD20A4Q4UJ75 823 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 C1orf189Q5VU69 101 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 ATG14Q6ZNE5 492 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms