RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CD248Q9HCU0 757 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 TMEM45AQ9NWC5 275 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 FAM8A1Q9UBU6 413 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 CCL27Q9Y4X3 112 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 NCOR2Q9Y618 2525 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 CROCCQ5TZA2 2017 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 DCHS1Q96JQ0 3298 aa11.58□□□□□ -0.56
TRIM40-205ENST00000307859 KCNE1BA0A087WTH5 132 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 A0A1W2PQF6 199 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 BBIP1A8MTZ0 92 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 C2CD4DB7Z1M9 353 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 FBP2O00757 339 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CHUKO15111 745 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 LSM1O15116 133 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PLRG1O43660 514 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PCDH8O95206 1070 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CLDN9O95484 217 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PDGFBP01127 241 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 LMNAP02545 664 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PCCBP05166 539 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DRD1P21728 446 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MTTPP55157 894 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ACTR3P61158 418 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CDK3Q00526 305 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PLOD1Q02809 727 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ABRQ12979 859 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 LRP8Q14114 963 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ABRAXAS2Q15018 415 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PON2Q15165 354 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ATP6AP1LQ52LC2 224 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PDCD4Q53EL6 469 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 C6orf163Q5TEZ5 329 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 REP15Q6BDI9 236 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 NEK5Q6P3R8 708 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PAOXQ6QHF9 649 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 HACD2Q6Y1H2 254 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TRMT11Q7Z4G4 463 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TRIM46Q7Z4K8 759 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 C11orf96Q7Z7L8 435 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 UBALD2Q8IYN6 164 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 FBXW8Q8N3Y1 598 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 SFRP1Q8N474 314 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CFAP61Q8NHU2 1237 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 HM13Q8TCT9 377 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ATL1Q8WXF7 558 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 USP7Q93009 1102 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CCDC138Q96M89 665 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 NPAS2Q99743 824 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TEX101Q9BY14 249 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 WDR41Q9HAD4 459 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 HEBP1Q9NRV9 189 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ZFR2Q9UPR6 939 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 RNF11Q9Y3C5 154 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PIAS3Q9Y6X2 628 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 KRT87PA6NCN2 255 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MGAT4DA6NG13 374 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 H3BM21 787 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 SLC28A1O00337 649 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 NRP2O60462 931 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 RNASEH2AO75792 299 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 KLF8O95600 359 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 HOXB2P14652 356 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PDHA2P29803 388 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DIO3P55073 304 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PFN3P60673 137 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MRPS21P82921 87 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 ART3Q13508 389 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 FGL2Q14314 439 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 SMU1Q2TAY7 513 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TMEM259Q4ZIN3 620 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 KIAA1161Q6NSJ0 714 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 RIPOR1Q6ZS17 1223 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 CFAP206Q8IYR0 622 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 SNX31Q8N9S9 440 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 L3MBTL4Q8NA19 623 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TP53I13Q8NBR0 393 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 TSPEARQ8WU66 669 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MAGEB10Q96LZ2 347 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 PPP3R2Q96LZ3 170 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 FOPNLQ96NB1 174 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 MRPL1Q9BYD6 325 aaKnown RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DPEP2Q9H4A9 486 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DCLRE1BQ9H816 532 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DNAJC11Q9NVH1 559 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 FBXL12Q9NXK8 326 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 DLL3Q9NYJ7 618 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 STOX2Q9P2F5 926 aaPredicted RBP11.57□□□□□ -0.56
TRIM40-205ENST00000307859 SCML1Q9UN30 329 aa11.57□□□□□ -0.56
TRIM40-205ENST00000307859 GPR89AB7ZAQ6 455 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 MANBAO00462 879 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 UGDHO60701 494 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 POP7O75817 140 aaKnown RBP11.56□□□□□ -0.56
TRIM40-205ENST00000307859 PDE5AO76074 875 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 DNTTP04053 509 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 GPR89BP0CG08 455 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 TRIM23P36406 574 aa11.56□□□□□ -0.56
TRIM40-205ENST00000307859 DPP6P42658 865 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms