RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 PHOX2BQ99453 314 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FICDQ9BVA6 458 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 OR51E2Q9H255 320 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FBXW11Q9UKB1 542 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FAM92AA1XBS5 289 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 GSTA4O15217 222 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 PRKD3O94806 890 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 PGRP06401 933 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 IRF1P10914 325 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 ATF4P18848 351 aaPredicted RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 S100A5P33763 92 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 TGM4P49221 684 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 CBLBQ13191 982 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 LRRC26Q2I0M4 334 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 TMEM207Q6UWW9 146 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 MILR1Q7Z6M3 343 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FAM217AQ8IXS0 508 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 MYEOVQ96EZ4 313 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 HMX1Q9NP08 348 aaPredicted RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 EIF2B3Q9NR50 452 aaKnown RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FBXO5Q9UKT4 447 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 PCDHGB6Q9Y5F9 930 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 ARVCFO00192 962 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FHP07954 510 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 VEGFBP49765 207 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 NUDT6P53370 316 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 FAM98BQ52LJ0 330 aaKnown RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 CHAC2Q8WUX2 184 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 PTERQ96BW5 349 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 KAT8Q9H7Z6 458 aaKnown RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 NECTIN3Q9NQS3 549 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 POLR3BQ9NW08 1133 aaPredicted RBP15.89■□□□□ 0.13
CCDC8-201ENST00000307522 SMPD4Q9NXE4 827 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 BTBD3Q9Y2F9 522 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 KLHL20Q9Y2M5 609 aa15.89■□□□□ 0.13
CCDC8-201ENST00000307522 PABPN1LA6NDY0 278 aaKnown RBP15.88■□□□□ 0.13
CCDC8-201ENST00000307522 CBX2Q14781 532 aaPredicted RBP15.88■□□□□ 0.13
CCDC8-201ENST00000307522 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 FAM205BPQ63HN1 556 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 BLOC1S3Q6QNY0 202 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 HACD2Q6Y1H2 254 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 RIMKLAQ8IXN7 391 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 OR10A6Q8NH74 314 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 EXOC2Q96KP1 924 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 CDK15Q96Q40 435 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 SMIM14Q96QK8 99 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 VAT1Q99536 393 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 MCMBPQ9BTE3 642 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 ZNF639Q9UID6 485 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 LRFN2Q9ULH4 789 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 OR6C70A6NIJ9 312 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 C10orf120Q5SQS8 335 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 ZNF544Q6NX49 715 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 PHACTR4Q8IZ21 702 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 LSMEM1Q8N8F7 131 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 OR6P1Q8NGX9 317 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 TRNT1Q96Q11 434 aaKnown RBP15.88■□□□□ 0.13
CCDC8-201ENST00000307522 THUMPD3Q9BV44 507 aaKnown RBP15.88■□□□□ 0.13
CCDC8-201ENST00000307522 RNF208Q9H0X6 261 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 RERGLQ9H628 205 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
CCDC8-201ENST00000307522 SMIM30A4D0T7 59 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 LOC110117498-PIK3R3F6TDL0 507 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 PTPRCAPQ14761 206 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 LHX8Q68G74 356 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ZNF517Q6ZMY9 492 aaPredicted RBP15.87■□□□□ 0.13
CCDC8-201ENST00000307522 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.87■□□□□ 0.137e-9■■■□□ 15.8
CCDC8-201ENST00000307522 SLC24A5Q71RS6 500 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 BRSK1Q8TDC3 778 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 TAS2R16Q9NYV7 291 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 OSGIN1Q9UJX0 560 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 M0R129 80 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 DSCR3O14972 297 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 C7P10643 843 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 CDKN2DP55273 166 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 DSC3Q14574 896 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 NFE2Q16621 373 aaPredicted RBP15.87■□□□□ 0.13
CCDC8-201ENST00000307522 TRIM71Q2Q1W2 868 aaKnown RBP15.87■□□□□ 0.13
CCDC8-201ENST00000307522 GLCCI1Q86VQ1 547 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 SLC2A13Q96QE2 648 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ZSCAN5AQ9BUG6 496 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 TIGARQ9NQ88 270 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ADGRE2Q9UHX3 823 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 POLHQ9Y253 713 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ENPP3O14638 875 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 HAT1O14929 419 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 AZIN1O14977 448 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 DCLK1O15075 740 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 PTTG1O95997 202 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 IGHA2P01877 340 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 TAF10Q12962 218 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ZNF181Q2M3W8 571 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ALFQ53S48 1182 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 ZNF678Q5SXM1 525 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 CYP4Z1Q86W10 505 aa15.87■□□□□ 0.13
CCDC8-201ENST00000307522 TMEM86AQ8N2M4 240 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms