RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 COL5A1P20908 1838 aaPredicted RBP26.36■■□□□ 1.81
HDAC3-201ENST00000305264 DMXL1Q9Y485 3027 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 TARM1B6A8C7 271 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 MTHFD2P13995 350 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 BIRC2Q13490 618 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 STPG1Q5TH74 334 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 TMEM26Q6ZUK4 368 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 LMNTD1Q8N9Z9 388 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 AVL9Q8NBF6 648 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 OR9A1PQ8NGU1 263 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 FAM111AQ96PZ2 611 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 KCNK9Q9NPC2 374 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 PADI4Q9UM07 663 aa26.36■■□□□ 1.81
HDAC3-201ENST00000305264 SUPT3HB4E1H0 165 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 PRPF4O43172 522 aaKnown RBP eCLIP26.35■■□□□ 1.81
HDAC3-201ENST00000305264 SH3BP5O60239 455 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 SUPT3HO75486 399 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 HIST1H2AGP0C0S8 130 aaPredicted RBP26.35■■□□□ 1.81
HDAC3-201ENST00000305264 HIST1H2ADP20671 130 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 NR0B2Q15466 257 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 NAXDQ8IW45 347 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 RHBDD1Q8TEB9 315 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 DENND1AQ8TEH3 1009 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 HIST1H2AHQ96KK5 128 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 HIST1H2AJQ99878 128 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 H2AFJQ9BTM1 129 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 TRIM54Q9BYV2 358 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 XKR8Q9H6D3 395 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 ICKQ9UPZ9 632 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 ASXL3Q9C0F0 2248 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 CCDC189A1A4V9 331 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 H3BQF6 201 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 SLC16A8O95907 504 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 HPDP32754 393 aaPredicted RBP26.35■■□□□ 1.81
HDAC3-201ENST00000305264 AP1S2P56377 157 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 PLCL1Q15111 1095 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 LRIT1Q9P2V4 623 aa26.35■■□□□ 1.81
HDAC3-201ENST00000305264 TMEM120BA0PK00 339 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 PABPN1LA6NDY0 278 aaKnown RBP26.34■■□□□ 1.81
HDAC3-201ENST00000305264 NUDT21O43809 227 aaKnown RBP26.34■■□□□ 1.81
HDAC3-201ENST00000305264 RP1P56715 2156 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 CCDC153Q494R4 210 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 HSP90B2PQ58FF3 399 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 GUSBP11Q6P575 273 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 RBM12BQ8IXT5 1001 aaKnown RBP26.34■■□□□ 1.81
HDAC3-201ENST00000305264 ARMC2Q8NEN0 867 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 ZFPM2Q8WW38 1151 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 EGFL8Q99944 293 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 TBC1D10AQ9BXI6 508 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 MED4Q9NPJ6 270 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 CD274Q9NZQ7 290 aa26.34■■□□□ 1.81
HDAC3-201ENST00000305264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.33■■□□□ 1.81
HDAC3-201ENST00000305264 RHPN2P1A8MT19 583 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 SYCE1LA8MT33 242 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 GFRA3O60609 400 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 GLB1P16278 677 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 CCDC138Q96M89 665 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 NUDT4Q9NZJ9 180 aa26.33■■□□□ 1.81
HDAC3-201ENST00000305264 STOX2Q9P2F5 926 aaPredicted RBP26.33■■□□□ 1.81
HDAC3-201ENST00000305264 IMPA1P29218 277 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 PKLRP30613 574 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 CDKL1Q00532 357 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 ZXDCQ2QGD7 858 aaPredicted RBP26.33■■□□□ 1.8
HDAC3-201ENST00000305264 FBXO48Q5FWF7 155 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 PDPRQ8NCN5 879 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 LCN9Q8WX39 176 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 CNDP2Q96KP4 475 aaKnown RBP26.33■■□□□ 1.8
HDAC3-201ENST00000305264 SELENOSQ9BQE4 189 aa26.33■■□□□ 1.8
HDAC3-201ENST00000305264 CKMT1AP12532 417 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 C18orf21Q32NC0 220 aaPredicted RBP26.32■■□□□ 1.8
HDAC3-201ENST00000305264 ZNF438Q7Z4V0 828 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 CCDC63Q8NA47 563 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 ZNF480Q8WV37 535 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 CCDC74AQ96AQ1 378 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 RHBDF1Q96CC6 855 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 SLC38A3Q99624 504 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 UCK1Q9HA47 277 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 NCKIPSDQ9NZQ3 722 aa26.32■■□□□ 1.8
HDAC3-201ENST00000305264 CPED1A4D0V7 1026 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 ANXA5P08758 320 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 ETV4P43268 484 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 RAB28P51157 221 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 DAB2P98082 770 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 ANKRD42Q8N9B4 389 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 PPFIBP2Q8ND30 876 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 OR4E2Q8NGC2 313 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 SH3KBP1Q96B97 665 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 SPATA7Q9P0W8 599 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 EME2A4GXA9 379 aaPredicted RBP26.31■■□□□ 1.8
HDAC3-201ENST00000305264 LILRA5A6NI73 299 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 G3V2L1 256 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 CBFA2T3O75081 653 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 ERGP11308 486 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 GFAPP14136 432 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 FASTKQ14296 549 aaKnown RBP26.31■■□□□ 1.8
HDAC3-201ENST00000305264 PFKFB4Q16877 469 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 KIAA2013Q8IYS2 634 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 C2orf73Q8N5S3 287 aaPredicted RBP26.31■■□□□ 1.8
HDAC3-201ENST00000305264 LINC01555Q8NAE3 123 aa26.31■■□□□ 1.8
HDAC3-201ENST00000305264 BAHD1Q8TBE0 780 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms