RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SLC28A1O00337 649 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 C1orf105O95561 183 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 PAK4O96013 591 aaPredicted RBP21.7■■□□□ 1.06
SMAD1-201ENST00000302085 HOXB2P14652 356 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 CAPN3P20807 821 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 ERFP50548 548 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 UFM1P61960 85 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 CEACAM7Q14002 265 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 NFE2L1Q14494 772 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 INPP5AQ14642 412 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 ZNF423Q2M1K9 1284 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 RFTN2Q52LD8 501 aaPredicted RBP21.7■■□□□ 1.06
SMAD1-201ENST00000302085 ATL1Q8WXF7 558 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 C1QTNF2Q9BXJ5 285 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 TEX101Q9BY14 249 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 MAP10Q9P2G4 905 aa21.7■■□□□ 1.06
SMAD1-201ENST00000302085 SZT2Q5T011 3432 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 RGS14O43566 566 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 RCN1Q15293 331 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 IRF4Q15306 451 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 GGTA1PQ4G0N0 100 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 THOC6Q86W42 341 aaKnown RBP21.69■■□□□ 1.06
SMAD1-201ENST00000302085 TP53I13Q8NBR0 393 aaPredicted RBP21.69■■□□□ 1.06
SMAD1-201ENST00000302085 HM13Q8TCT9 377 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 STMN2Q93045 179 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 MTFMTQ96DP5 389 aaKnown RBP21.69■■□□□ 1.06
SMAD1-201ENST00000302085 PPP3R2Q96LZ3 170 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 SERPINI1Q99574 410 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 C8orf33Q9H7E9 229 aaPredicted RBP21.69■■□□□ 1.06
SMAD1-201ENST00000302085 SLC23A2Q9UGH3 650 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 DOCK9Q9BZ29 2069 aa21.69■■□□□ 1.06
SMAD1-201ENST00000302085 BBIP1A8MTZ0 92 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 PLRG1O43660 514 aaKnown RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 SLC22A3O75751 556 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 DNTTP04053 509 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 GNAZP19086 355 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 THOP1P52888 689 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 HMGCS1Q01581 520 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 GRSF1Q12849 480 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 NAE1Q13564 534 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 CCNIQ14094 377 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 IL23RQ5VWK5 629 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 LAYNQ6UX15 382 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 HACD2Q6Y1H2 254 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 KLHDC8AQ8IYD2 350 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 RGL4Q8IZJ4 473 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 FBXO15Q8NCQ5 510 aaPredicted RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 OR14C36Q8NHC7 312 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 OSBPL6Q9BZF3 934 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 FBRSQ9HAH7 460 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 NDUFAF1Q9Y375 327 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 PRR23AA6NEV1 266 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 E7ENX8 843 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 SLC16A8O95907 504 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 KRT6AP02538 564 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 KRT6BP04259 564 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 SLC2A4P14672 509 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 DRD1P21728 446 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 ACADLP28330 430 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 IMPA1P29218 277 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 TRIM23P36406 574 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 KRT6CP48668 564 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 RPS21P63220 83 aaKnown RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 PLOD1Q02809 727 aaPredicted RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 C8orf82Q6P1X6 216 aaPredicted RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 TRMT11Q7Z4G4 463 aaKnown RBP21.68■■□□□ 1.06
SMAD1-201ENST00000302085 ZIM2Q9NZV7 527 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 OR1A2Q9Y585 309 aa21.68■■□□□ 1.06
SMAD1-201ENST00000302085 A0A1W2PQU0 124 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 PDYNP01213 254 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 G6PDP11413 515 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 TEAD1P28347 426 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 IL12AP29459 219 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 CCR3P51677 355 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 HOMEZQ8IX15 550 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 PPFIBP2Q8ND30 876 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 OR56A3Q8NH54 315 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 PROKR1Q8TCW9 393 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 TSPEARQ8WU66 669 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 DPEP2Q9H4A9 486 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 RNGTTO60942 597 aaKnown RBP21.67■■□□□ 1.06
SMAD1-201ENST00000302085 NEK2P51955 445 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 CHIT1Q13231 466 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 SGCGQ13326 291 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 LRIT3Q3SXY7 679 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 TMEM259Q4ZIN3 620 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 RNF148Q8N7C7 305 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 OR4K3Q96R72 315 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 ZDHHC5Q9C0B5 715 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 OR52A5Q9H2C5 316 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 TM7SF3Q9NS93 570 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 CROTQ9UKG9 612 aa21.67■■□□□ 1.06
SMAD1-201ENST00000302085 XRCC1P18887 633 aaPredicted RBP21.66■■□□□ 1.06
SMAD1-201ENST00000302085 HALP42357 657 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 GNPDA1P46926 289 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 MRPS21P82921 87 aaKnown RBP21.66■■□□□ 1.06
SMAD1-201ENST00000302085 CYP20A1Q6UW02 462 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 LRRTM4Q86VH4 590 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 AMZ2Q86W34 360 aa21.66■■□□□ 1.06
SMAD1-201ENST00000302085 PCYOX1LQ8NBM8 494 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms