RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 CHST10O43529 356 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 TBX18O95935 607 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ALPPL2P10696 532 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 NPR2P20594 1047 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CCNCP24863 283 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 FAM214AQ32MH5 1076 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 IRF2BP1Q8IU81 584 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PIK3R3Q92569 461 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 MGME1Q9BQP7 344 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 HEPHQ9BQS7 1158 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ACOX3O15254 700 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ALPIP09923 528 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CDKN2BP42772 138 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PTPN9P43378 593 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 MAP2K4P45985 399 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 MERTKQ12866 999 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 LARS2Q15031 903 aaKnown RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 SFT2D3Q587I9 215 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CDKL4Q5MAI5 379 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 MSANTD2Q6P1R3 559 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 TUBA8Q9NY65 449 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 GRXCR1A8MXD5 290 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 H6PDO95479 791 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 OR3A3P47888 321 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 OR3A2P47893 321 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 SLC25A52Q3SY17 297 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 KANK2Q63ZY3 851 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 HSDL2Q6YN16 418 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 HFE2Q6ZVN8 426 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF431Q8TF32 576 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 SEC61A2Q9H9S3 476 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PADI2Q9Y2J8 665 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 A8MU76 341 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PAPSS2O95340 614 aaPredicted RBP12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CXCL14O95715 111 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 CKMT1AP12532 417 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 GMPRP36959 345 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 RHDQ02161 417 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PTPRCAPQ14761 206 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PCDH19Q8TAB3 1148 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 PIGXQ8TBF5 258 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 OSBPL2Q9H1P3 480 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 SACM1LQ9NTJ5 587 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 DNAJC27Q9NZQ0 273 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ALG5Q9Y673 324 aa12.14□□□□□ -0.47
ABCA3-201ENST00000301732 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 AKR1A1P14550 325 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF182P17025 639 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 BATFQ16520 125 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 RBM48Q5RL73 367 aaKnown RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 RDH11Q8TC12 318 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 EFHD2Q96C19 240 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 MSLNLQ96KJ4 702 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 IFT80Q9P2H3 777 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 SLC7A8Q9UHI5 535 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 PCDHGA12O60330 932 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 ACVR2AP27037 513 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 STT3AP46977 705 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 TMEM220Q6QAJ8 160 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 JAGN1Q8N5M9 183 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 TMBIM1Q969X1 311 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 NSMCE3Q96MG7 304 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 MYEF2Q9P2K5 600 aaKnown RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 CAPN14A8MX76 684 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 TLL1O43897 1013 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 NIPSNAP2O75323 286 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 NCBP2P52298 156 aaKnown RBP eCLIP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 MRPS6P82932 125 aaKnown RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 ID2Q02363 134 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 CES5AQ6NT32 575 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 USP43Q70EL4 1123 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 RDH12Q96NR8 316 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 AIF1LQ9BQI0 150 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 UNC93B1Q9H1C4 597 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 SLC27A6Q9Y2P4 619 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 GLOD5A6NK44 160 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 E7EQ34 232 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
ABCA3-201ENST00000301732 CRB2Q5IJ48 1285 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
ABCA3-201ENST00000301732 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms