RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 DGKKQ5KSL6 1271 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 BROXQ5VW32 411 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 RNF168Q8IYW5 571 aaPredicted RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CHPFQ8IZ52 775 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 NXPE1Q8N323 547 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 RNF175Q8N4F7 328 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 AADATQ8N5Z0 425 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 EGLN2Q96KS0 407 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 TSSK3Q96PN8 268 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 BARD1Q99728 777 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 TUBA1CQ9BQE3 449 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 DCAF13Q9NV06 445 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 SRRDQ9UH36 339 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 PPT2Q9UMR5 302 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CPQQ9Y646 472 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 BNIP3LO60238 219 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 HS6ST1O60243 411 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 ABCB7O75027 752 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 LRATO95237 230 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 HPRP00739 348 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CCR7P32248 378 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 DCTP40126 519 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CTSOP43234 321 aaPredicted RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 MAD2L1Q13257 205 aaPredicted RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 LAPTM4AQ15012 233 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 DPY19L1Q2PZI1 675 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 C6orf141Q5SZD1 244 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 Q6ZNB5 142 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 GPR149Q86SP6 731 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CALHM3Q86XJ0 350 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CD99L2Q8TCZ2 262 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 IGSF21Q96ID5 467 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CPPED1Q9BRF8 314 aaPredicted RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 DNAAF2Q9NVR5 837 aaKnown RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 IRAK4Q9NWZ3 460 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 PDE10AQ9Y233 779 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 GMEB1Q9Y692 573 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 MITFO75030 526 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 WDR47O94967 919 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 SCELO95171 688 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CLDN9O95484 217 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CD70P32970 193 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 SPAM1P38567 509 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 RPIAP49247 311 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 STK19P49842 368 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PLA2G16P53816 162 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CCL23P55773 120 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 RPS14P62263 151 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 GTF2IRD2BQ6EKJ0 949 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CRTC1Q6UUV9 634 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 Q6ZNX1 250 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 TPGS1Q6ZTW0 290 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 GTF2IRD2Q86UP8 949 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 GLB1L3Q8NCI6 653 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PNPT1Q8TCS8 783 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 SDCCAG3Q96C92 435 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 AASSQ9UDR5 926 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 TMEFF2Q9UIK5 374 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PRAMEF4O60810 478 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 HOXB9P17482 250 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CCNA2P20248 432 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 MAP4P27816 1152 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PTPN6P29350 595 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 NRIP1P48552 1158 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 TPD52P55327 224 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 LMAN2Q12907 356 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 SPIDRQ14159 915 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PGS1Q32NB8 556 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 PRAMEF9Q5VWM5 478 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 DET1Q7L5Y6 550 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 VRK3Q8IV63 474 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 MIPOL1Q8TD10 442 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 RDH14Q9HBH5 336 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 ARL15Q9NXU5 204 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 ASIC5Q9NY37 505 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 USE1Q9NZ43 259 aa13.29□□□□□ -0.28
BCCIP-202ENST00000299130 INTS6Q9UL03 887 aaKnown RBP13.29□□□□□ -0.28
BCCIP-202ENST00000299130 J3QRK9 145 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms