RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 NOMO3P69849 1222 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 XKRXQ6PP77 449 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 DGAT2Q96PD7 388 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TXN2Q99757 166 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 DEC1Q9P2X7 70 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TMEM150BA6NC51 233 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SULT1B1O43704 296 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ATP6V1G1O75348 118 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 LAG3P18627 525 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 PTPN6P29350 595 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 MTHFRP42898 656 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 OR5T1Q8NG75 326 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 STYXQ8WUJ0 223 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 DKKL1Q9UK85 242 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 BACE2Q9Y5Z0 518 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 RPP40O75818 363 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 DNAAF5Q86Y56 855 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 OR6K2Q8NGY2 324 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 LPIN3Q9BQK8 851 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SPATA31C2B4DYI2 1134 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 AP5Z1O43299 807 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 PRKAR1BP31321 381 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 HNRNPKP61978 463 aaKnown RBP eCLIP11.86□□□□□ -0.51
PCF11-201ENST00000298281 VTCN1Q7Z7D3 282 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 CRYBG2Q8N1P7 616 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ANKK1Q8NFD2 765 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 OR5J2Q8NH18 312 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SLC22A17Q8WUG5 538 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ZFP3Q96NJ6 502 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 GLOD4Q9HC38 313 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 TM9SF3Q9HD45 589 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 C11orf16Q9NQ32 467 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ACTR10Q9NZ32 417 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 J3QRK9 145 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 TPSB2P20231 275 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 HOXA10P31260 410 aaPredicted RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 GALK2Q01415 458 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 HSPB3Q12988 150 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 TPSAB1Q15661 275 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 RCN3Q96D15 328 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 LGMNQ99538 433 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 PCBD2Q9H0N5 130 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 OR1F1O43749 312 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 GJB6O95452 261 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 PRNPP04156 253 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 KLK3P07288 261 aaPredicted RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 CD53P19397 219 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 HCAR3P49019 387 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 UNC5BQ8IZJ1 945 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 NPLQ9BXD5 320 aaPredicted RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 AASSQ9UDR5 926 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ERVW-1Q9UQF0 538 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 ANKRD33BA6NCL7 494 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 H3BNX3 289 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SCDO00767 359 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 SLC31A1O15431 190 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 PCDHGA12O60330 932 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 CXCR1P25024 350 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 CPSF7Q8N684 471 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
PCF11-201ENST00000298281 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
PCF11-201ENST00000298281 FSCN2O14926 492 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 SYNGR4O95473 234 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 SLC35G6P0C7Q6 338 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 JMJD7P0C870 316 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PSKH1P11801 424 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 GOLM1Q8NBJ4 401 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 OR4K17Q8NGC6 315 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TBX5Q99593 518 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 FADS2P1A8MWK0 482 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ABLIM1O14639 778 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 EPHX1P07099 455 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PKMP14618 531 aaKnown RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 FMO1Q01740 532 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 SNTA1Q13424 505 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 IQCHQ86VS3 1027 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 PRELID2Q8N945 189 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PIGXQ8TBF5 258 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms