RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TTC28Q96AY4 2481 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 TDRD6O60522 2096 aaKnown RBP23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 TNRC6BQ9UPQ9 1833 aaKnown RBP23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 OR7A17O14581 309 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 CCNT2O60583 730 aaKnown RBP23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 EML2O95834 649 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 RPN2P04844 631 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 BLKP51451 505 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 SRSF5Q13243 272 aaKnown RBP23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 ZNF542PQ5EBM4 170 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 SH2D4BQ5SQS7 431 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 PMS2CLQ68D20 193 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 LRRC70Q7Z2Q7 622 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 RGL4Q8IZJ4 473 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 TEX9Q8N6V9 391 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 ANKS4BQ8N8V4 417 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 CCDC197Q8NCU1 140 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 OR56A3Q8NH54 315 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 ZNF480Q8WV37 535 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 ZNF382Q96SR6 550 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 ATG10Q9H0Y0 220 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 NOL11Q9H8H0 719 aaKnown RBP23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 MID1IP1Q9NPA3 183 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 KCNK4Q9NYG8 393 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 SPAG17Q6Q759 2223 aa23.94■■□□□ 1.42
GTF2A1-201ENST00000298173 VILLO15195 856 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 HRO43593 1189 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 CSF2P04141 144 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 PRDX3P30048 256 aaKnown RBP23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 ACTR1BP42025 376 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 ACTR1AP61163 376 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 RPE65Q16518 533 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 ARMCX6Q7L4S7 300 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 LRRC56Q8IYG6 542 aaPredicted RBP23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 PHACTR4Q8IZ21 702 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 CACNA2D3Q8IZS8 1091 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 AGR3Q8TD06 166 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 SKA1Q96BD8 255 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 MENTQ9BUN1 341 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 TRIT1Q9H3H1 467 aaKnown RBP23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 IPPKQ9H8X2 491 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 INTS7Q9NVH2 962 aaKnown RBP23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 CIDEBQ9UHD4 219 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 ARL2BPQ9Y2Y0 163 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 TRAF6Q9Y4K3 522 aa23.93■■□□□ 1.42
GTF2A1-201ENST00000298173 PDZK1P1A8MUH7 402 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 SLCO1B7G3V0H7 640 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 BCAT2O15382 392 aaPredicted RBP23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 ESRRBO95718 433 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 EPORP19235 508 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 ITPKAP23677 461 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 AQP5P55064 265 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 NXPH1P58417 271 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 ILF3Q12906 894 aaKnown RBP eCLIP23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 UGT3A2Q3SY77 523 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 KIRREL3Q8IZU9 778 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 CLYBLQ8N0X4 340 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 OR52B6Q8NGF0 335 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 PYCR2Q96C36 320 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 VTI1BQ9UEU0 232 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 SDK1Q7Z5N4 2213 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 A0A0C4DFX4 3053 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 A0A0G2JND7 137 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 OR52A4PA6NMU1 304 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 TMEM233B4DJY2 109 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 HDAC3O15379 428 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 ERGP11308 486 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 EPB42P16452 691 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 ARFIP2P53365 341 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 PKNOX1P55347 436 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 DUS1LQ6P1R4 473 aaKnown RBP23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 SLC30A9Q6PML9 568 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 SYVN1Q86TM6 617 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 FERD3LQ96RJ6 166 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 NTMT1Q9BV86 223 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 GSDMCQ9BYG8 508 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 SLC22A14Q9Y267 594 aa23.92■■□□□ 1.42
GTF2A1-201ENST00000298173 E7ENX8 843 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 NME1P15531 152 aaKnown RBP23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 AVPR2P30518 371 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 PIK3CGP48736 1102 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 CSNK1EP49674 416 aaKnown RBP23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 TAP2Q03519 686 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 PRKG2Q13237 762 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 NAE1Q13564 534 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 PLK5Q496M5 336 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 MAPK15Q8TD08 544 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 TMEM120AQ9BXJ8 343 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 MVB12BQ9H7P6 319 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 IMP3Q9NV31 184 aaKnown RBP23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 PCM1Q15154 2024 aa23.91■■□□□ 1.42
GTF2A1-201ENST00000298173 WDR47O94967 919 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 MTHFD1P11586 935 aaKnown RBP23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 F3P13726 295 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 JUNDP17535 347 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 AFF3P51826 1226 aaKnown RBP23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 FOXA1P55317 472 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 ERVPABLB-1P60509 514 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 TRAF3Q13114 568 aa23.9■■□□□ 1.42
GTF2A1-201ENST00000298173 ARHGAP19Q14CB8 494 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms