RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 WDR92Q96MX6 357 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 A8MU76 341 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 GMFGO60234 142 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 PTX3P26022 381 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 TMEM115Q12893 351 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 C15orf39Q6ZRI6 1047 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 HCAR2Q8TDS4 363 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 GPR151Q8TDV0 419 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZHX1-C8orf76Q96EF9 292 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 OR2M4Q96R27 311 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 MRM3Q9HC36 420 aaKnown RBP17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 TCRBV7S3A2A0A539 114 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 SEMA3AQ14563 771 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 TCEAL5Q5H9L2 206 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 TRIQKQ629K1 86 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 DNAAF2Q9NVR5 837 aaKnown RBP17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 NLE1Q9NVX2 485 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 SCELO95171 688 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 SP140Q13342 867 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 GPRIN1Q7Z2K8 1008 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 AMIGO2Q86SJ2 522 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 MAPK15Q8TD08 544 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 CDH7Q9ULB5 785 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 CHD4Q14839 1912 aa17.34■□□□□ 0.37
CDC42EP3-201ENST00000295324 PNMA8CA0A1B0GUJ8 204 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 STK19P49842 368 aaPredicted RBP17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 FRG2Q64ET8 278 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 ABRAXAS1Q6UWZ7 409 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 CLNKQ7Z7G1 428 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 FRG2BQ96QU4 278 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 PTGFRNQ9P2B2 879 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 CFL2Q9Y281 166 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.37
CDC42EP3-201ENST00000295324 OR5K4A6NMS3 321 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 HOXC12P31275 282 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 ELF3P78545 371 aaPredicted RBP17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 PDZK1Q5T2W1 519 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIK3R6Q5UE93 754 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 MLIPQ5VWP3 458 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 JAZF1Q86VZ6 243 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZC3HC1Q86WB0 502 aaKnown RBP17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRPV3Q8NET8 790 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 IGSF8Q969P0 613 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 ELL3Q9HB65 397 aaPredicted RBP17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM159BA6NKW6 160 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 NDUFS4O43181 175 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 NR2F6P10588 404 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 PRPS1L1P21108 318 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC26A3P40879 764 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 LIPEQ05469 1076 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 VWA5B1Q5TIE3 1220 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 DCAF12L1Q5VU92 463 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC13A3Q8WWT9 602 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIGKQ92643 395 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 NELL2Q99435 816 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC22A14Q9Y267 594 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 A0A1W2PRB8 838 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 IRGMA1A4Y4 181 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 TGFB1P01137 390 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPIN4Q56A73 249 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 ANKRD46Q86W74 232 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF540Q8NDQ6 660 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 KIFC1Q9BW19 673 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 GPR174Q9BXC1 333 aa17.33■□□□□ 0.36
CDC42EP3-201ENST00000295324 A0A0G2JN53 185 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 IL7RP16871 459 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 GKP32189 559 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM174BQ3ZCQ3 159 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 THOC6Q86W42 341 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 STRADBQ9C0K7 418 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PRORSD1PA6NEY8 169 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 JMJD7P0C870 316 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PRKCHP24723 683 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 BDKRB1P46663 353 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 NCBP2P52298 156 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 DGCR6Q14129 220 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 RPTNQ6XPR3 784 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PTCHD4Q6ZW05 846 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 SFRP1Q8N474 314 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 Q8N9G6 341 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 NMD3Q96D46 503 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ART5Q96L15 291 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 SLC29A3Q9BZD2 475 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 KLHL31Q9H511 634 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZCCHC3Q9NUD5 404 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 THUMPD1Q9NXG2 353 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 KCTD3Q9Y597 815 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 AHSGP02765 367 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PRDX6P30041 224 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 TTKP33981 857 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 SHMT2P34897 504 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ERVK-8P63133 956 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 QPCTQ16769 361 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 AGTRAPQ6RW13 159 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms