RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 EIF1AYO14602 144 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 LINGO3P0C6S8 592 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PTGIRP43119 386 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 EIF1AXP47813 144 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TMEM198Q66K66 360 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 MTFR2Q6P444 385 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 RANBP3LQ86VV4 465 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 DTX3Q8N9I9 347 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 SLC38A4Q969I6 547 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 MTERF1Q99551 399 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 BEX2Q9BXY8 128 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 FBRSQ9HAH7 460 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 BEX1Q9HBH7 125 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 C2orf74A8MZ97 194 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 OR1I1O60431 355 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 C4BPAP04003 597 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 LIMK2P53671 638 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 SDCBP2Q9H190 292 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CCDC177Q9NQR7 707 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF358Q9NW07 568 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 MIOSQ9NXC5 875 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 FARSAQ9Y285 508 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PER2O15055 1255 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TLL1O43897 1013 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 EPHX1P07099 455 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 RPS2P15880 293 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CASP7P55210 303 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PITPNAQ00169 270 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 SLC3A1Q07837 685 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TSTQ16762 297 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CDKL4Q5MAI5 379 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 BRMS1LQ5PSV4 323 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 POMPQ9Y244 141 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PCDHB1Q9Y5F3 818 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 PCDHGB3Q9Y5G1 929 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TCRBV7S3A2A0A539 114 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 SPATA31C2B4DYI2 1134 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 CXCL11O14625 94 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 UGT1A6P19224 532 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 UGT1A1P22309 533 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 UGT1A4P22310 534 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 UGT1A3P35503 534 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 COL9A2Q14055 689 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 LIN28AQ9H9Z2 209 aaKnown RBP15.84■□□□□ 0.13
SSRP1-202ENST00000293880 TRPS1Q9UHF7 1281 aa15.84■□□□□ 0.13
SSRP1-202ENST00000293880 A0A1B0GVT2 93 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 VIPP01282 170 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 SRCP12931 536 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 ADAM8P78325 824 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 TUSC3Q13454 348 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 TUBB3Q13509 450 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 SYT16Q17RD7 645 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF662Q6ZS27 426 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 CYP4V2Q6ZWL3 525 aaPredicted RBP15.83■□□□□ 0.13
SSRP1-202ENST00000293880 RPS27LQ71UM5 84 aaKnown RBP15.83■□□□□ 0.13
SSRP1-202ENST00000293880 STYXQ8WUJ0 223 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 PSMG2Q969U7 264 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 NSMCE3Q96MG7 304 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF649Q9BS31 505 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 UQCRC1P31930 480 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 LCP2Q13094 533 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 PARP15Q460N3 678 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 CYP27C1Q4G0S4 372 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 GALNT7Q86SF2 657 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 TMC8Q8IU68 726 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 FSTL5Q8N475 847 aaPredicted RBP15.83■□□□□ 0.13
SSRP1-202ENST00000293880 SRFBP1Q8NEF9 429 aaKnown RBP15.83■□□□□ 0.13
SSRP1-202ENST00000293880 FZD10Q9ULW2 581 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 WDR37Q9Y2I8 494 aa15.83■□□□□ 0.13
SSRP1-202ENST00000293880 PRMT5O14744 637 aaPredicted RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 LRCH4O75427 683 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 GLUD1P00367 558 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CES1P23141 567 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CMPK1P30085 196 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CTSOP43234 321 aaPredicted RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 TMEM220Q6QAJ8 160 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CNTD1Q8N815 330 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 OSBPL7Q9BZF2 842 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 KAT8Q9H7Z6 458 aaKnown RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 TRPV4Q9HBA0 871 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CCDC163A0A0D9SF12 145 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF14P17017 642 aaPredicted RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 NUDT6P53370 316 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 HYAL2Q12891 473 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 UBXN11Q5T124 520 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 SNX29P2Q8IUI4 249 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 TAS2R7Q9NYW3 318 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 PTBP2Q9UKA9 531 aaKnown RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 BCL9O00512 1426 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 ISPDA4D126 451 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 H3BSA7 217 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 KHNYNO15037 678 aaKnown RBP15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CDK14O94921 469 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CH25HO95992 272 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 CDH4P55283 916 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 AP1S1P61966 158 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 IFI44LQ53G44 452 aa15.83■□□□□ 0.12
SSRP1-202ENST00000293880 GALNT13Q8IUC8 556 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms