RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CYP2A7P20853 494 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 PSMA3P25788 255 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 ACADLP28330 430 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 PRDX3P30048 256 aaKnown RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SHMT2P34897 504 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 CD151P48509 253 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 GNG11P61952 73 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TUBB4BP68371 445 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SARNPP82979 210 aaKnown RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 ABHD18Q0P651 414 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 DNASE1L3Q13609 305 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TSTA3Q13630 321 aaPredicted RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TUBB2AQ13885 445 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 DHX34Q14147 1143 aaKnown RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 ERV3-1Q14264 604 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 IL11RAQ14626 422 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF789Q5FWF6 425 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 CTSL3PQ5NE16 218 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 CYB5D1Q6P9G0 228 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SPESP1Q6UW49 350 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TMEM135Q86UB9 458 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 CAND1Q86VP6 1230 aaKnown RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 KLHL7Q8IXQ5 586 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SLC22A15Q8IZD6 547 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 C17orf53Q8N3J3 647 aaPredicted RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 D2HGDHQ8N465 521 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 C19orf47Q8N9M1 422 aaKnown RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 OR5K2Q8NHB8 316 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 MR1Q95460 341 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 CLIP3Q96DZ5 547 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SERPINB12Q96P63 405 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TUBB2BQ9BVA1 445 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 KIFC1Q9BW19 673 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 SPRY4Q9C004 299 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 AKIRIN1Q9H9L7 192 aaPredicted RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 FBXO6Q9NRD1 293 aaPredicted RBP9.46□□□□□ -0.9
CCDC58-201ENST00000291458 NFS1Q9Y697 457 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 ATRXP46100 2492 aa9.46□□□□□ -0.9
CCDC58-201ENST00000291458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 CTAGE9A4FU28 777 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 E5RI56 91 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 AP3B1O00203 1094 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 MATN2O00339 956 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 GSTM1P09488 218 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TPBGLP0DKB5 382 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PAMP19021 973 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 AOAHP28039 575 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PSMB5P28074 263 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PEBP1P30086 187 aaKnown RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PKLRP30613 574 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 POLE2P56282 527 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 MPP1Q00013 466 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 GSTM4Q03013 218 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 GPS2Q13227 327 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 THOC5Q13769 683 aaKnown RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 SLC9A5Q14940 896 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 CYP1B1Q16678 543 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PTCHD3Q3KNS1 767 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 CCSMST1Q4G0I0 132 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 C1orf189Q5VU69 101 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 KIAA0930Q6ICG6 404 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 MRNIPQ6NTE8 343 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 BORAQ6PGQ7 559 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 CDHR3Q6ZTQ4 885 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 OTOAQ7RTW8 1153 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 KMT5CQ86Y97 462 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 DCUN1D3Q8IWE4 304 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 DENND6AQ8IWF6 608 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TBC1D21Q8IYX1 336 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 GRK7Q8WTQ7 553 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ZFPM2Q8WW38 1151 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ASZ1Q8WWH4 475 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PEX13Q92968 403 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ZNF501Q96CX3 271 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ITPKCQ96DU7 683 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 MED8Q96G25 268 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 SLC45A3Q96JT2 553 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TRAPPC9Q96Q05 1148 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 PANX3Q96QZ0 392 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TRIM51Q9BSJ1 452 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TRIM31Q9BZY9 425 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TRIM4Q9C037 500 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TWSG1Q9GZX9 223 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 P2RY12Q9H244 342 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ACTL8Q9H568 366 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 TFB2MQ9H5Q4 396 aaKnown RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 MRM3Q9HC36 420 aaKnown RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 LHX9Q9NQ69 397 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 C1GALT1Q9NS00 363 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 KCND1Q9NSA2 647 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 ABCF3Q9NUQ8 709 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 SLC39A10Q9ULF5 831 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 BTRCQ9Y297 605 aa9.45□□□□□ -0.9
CCDC58-201ENST00000291458 HEMK1Q9Y5R4 338 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-201ENST00000291458 FER1L5A0AVI2 2057 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms